Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02531 ATGGAGAACTCGGAGAAGGTGGTGGCTGTGATCATGGTGGGTGGGCCAACCAAAGGGACCAGATTTCGGCCTCTTTCCTTCAATATTCCCAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCACCATCCTATTTCTGCTTGCAAAAGGATACCCAATTTGGCTCATATATATCTTGTTGGATTCTATGAGGAGCGAGAATTTGCACTATATGTTTCTTCAATTTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAAGAGGATAAACCGCGTGGTTCAGCTGGTGGCCTTTACTACTTCAGAGATATTATCATGGACGACAGCCCATCACATATATTTCTGTTAAACTGTGATGTTTGCTGCAGTTTTCCACTACCAGCAATGCTTGATGCCCATAAAAGATATGGTGGGATGGGGACAATGTTGGTGATCAAGGTTTCAGCTGAATCTGCTAACCAATTCGGTGAGTTGGTCGCTGATCCAACCACTAATGAGTTGCTGCATTATACAGAGAAACCTGAGACATTTGTCAGCAATTTGATAAATTGTGGTGTGTACGTTTTCACCCCTAATATATTTACTGCAATCGACGATGTATATATTGGTCGAGAGGGCATAGCTAATCTACGTCGTCTCTCCAACTTTGAAACACTCCAATCTGCCACAAGGAATATTCCTGCAGATTTTGTACGACTGGATCAAGATATATTATCACCTCTAGCTGGGAAGAAGCAATTATATACGTATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCATTGAAATGCTCAGAATTGTATCTTGCTCAGTTCCGGTATACTTCACCTGATCTTTTGGCCTGTGGAGATGGTAATAAGAGTGCAACAGTTTCTGGTGATGTATATATTCATCCCTCTGCAAAAGTTCATCCATCTGCAAAGATTGGTCCCAATGTTTCTATCTCAGCAAATGTTCGTGTAGGTGCTGGCGTCAGGTTAAGCGGTTGTATCATCTTGGATGATGTTGAAATTATGGAAAATGCTTTCGTCACAAACTCGATTATTGGATGGAAGTCATCACTTGGAAGATGGTCACATGTGCAGGCTGATGGTAACTACAATGCAAGACTTGGCACAACCATCCTAGGGGAAGCTGTAACTGTTGAAGATGAAGTGGTAGTGTTCAACTGCATTGTTCTTCCCAACAAGACTCTTAATGTGAGTGTGCAAGAAGAAATCATCTTGTAA 1245 0.4177 MENSEKVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKRIPNLAHIYLVGFYEEREFALYVSSISNELKLPVRYLKEDKPRGSAGGLYYFRDIIMDDSPSHIFLLNCDVCCSFPLPAMLDAHKRYGGMGTMLVIKVSAESANQFGELVADPTTNELLHYTEKPETFVSNLINCGVYVFTPNIFTAIDDVYIGREGIANLRRLSNFETLQSATRNIPADFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRYTSPDLLACGDGNKSATVSGDVYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLSGCIILDDVEIMENAFVTNSIIGWKSSLGRWSHVQADGNYNARLGTTILGEAVTVEDEVVVFNCIVLPNKTLNVSVQEEIIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02531 414 Gene3D Hexapeptide repeat proteins 287 411 - -
Viun4g02531 414 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Viun4g02531 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Viun4g02531 414 Pfam Nucleotidyl transferase 9 198 IPR005835 GO:0009058
Viun4g02531 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Viun4g02531 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Viun4g02531 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 414 - -
Viun4g02531 414 FunFam Putative GDP-mannose pyrophosphorylase 284 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02531 Viun-Chr4 40220201 40226299 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02531 K00966 - gmx:100782402 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02531 4 40220201 40226299 Viun4g02531 4 40220201 40226299 ECH