Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02428 ATGAACAAAATCTTGAGATTTTGTTACAGTTCAAATACTAGGGCAAGGGAAGAAGAAGAAATAGAAAGTGGTGATTTGATTGAAGAGAAGAAGAAGAGTGATAATATGGTGTTGAAATTCAAGGAAACATTCTACGTTTCGCATGGATCACCAGCTCTGGCCGTAGATGATTCCATTCCGGCGTGGAAGTTCTTCACTTCTTGGAAAGAGCGGTTTCCGACGCCACCCTCCGCCATTCTCGTCGTCTCCGGCCACTGGGACACCCATGCTCCCACCGTCAACGTCGTTGACCGAAACGACACCATCTACGACTTCTATGGCTTCCCCAAATCCATGTACAAGTTGAAGTATCCAGCACCTGGGGCACCACAGTTGGCGAAGAGGGTGAAAGAGCTTTTAATAGGATCAGGGTTTGAGCATGTGAATGAAGACAAGAAACGTGGGCTTGACCATGGTGCATGGGTGCCATTGTTGTTGATGTACCCAGAAGCAGACATACCAGTGTGTCAACTCTCACTTTCATCCAACAAAGGAGGCACCTACCACTATAACATGGGAAAGGCTTTGGCCCCTCTCAAAGATGAAGGTGTTCTTATCATTGGGTCTGGGAGTGCCACCCATAACCTCAGAGCAATTGGGCCTCGTAATAGCCCACCTGCTCCATGGGCTCAAGCTTTTATGACCTGGCTCAAAACCTCTCTTCTTGAAGGAAGGTACGAGGAAGTGAATGAATATGAAGAGAAGGCCCCATATGCAAAAATGGCTCATCCCTACCCAGATCATTTCTTCCCACTGCATGTGGCCATGGGTGCTGCTGGTGAAAATGCAAAGGCCAAAATTGTTCACGATAGTTGGGATGCTGGTTCTTTTTCTTATGCTTCTTTCAGTTTTACAACTGCTAACACTTAA 909 0.4664 MNKILRFCYSSNTRAREEEEIESGDLIEEKKKSDNMVLKFKETFYVSHGSPALAVDDSIPAWKFFTSWKERFPTPPSAILVVSGHWDTHAPTVNVVDRNDTIYDFYGFPKSMYKLKYPAPGAPQLAKRVKELLIGSGFEHVNEDKKRGLDHGAWVPLLLMYPEADIPVCQLSLSSNKGGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAIGPRNSPPAPWAQAFMTWLKTSLLEGRYEEVNEYEEKAPYAKMAHPYPDHFFPLHVAMGAAGENAKAKIVHDSWDAGSFSYASFSFTTANT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02428 302 PIRSF Doxgns_DODA 36 299 IPR014436 GO:0008270|GO:0016701
Viun4g02428 302 Gene3D - 34 298 - -
Viun4g02428 302 CDD 45_DOPA_Dioxygenase 43 297 IPR014436 GO:0008270|GO:0016701
Viun4g02428 302 PANTHER UNCHARACTERIZED 39 300 - -
Viun4g02428 302 SUPERFAMILY LigB-like 43 297 - -
Viun4g02428 302 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 43 297 IPR004183 GO:0006725|GO:0008198|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02428 Viun-Chr4 39457545 39460824 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02428 K15777 - gmx:100810694 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02428 4 39457545 39460824 Viun4g02428 4 39457545 39460824 ECH