Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02388 ATGAAGCTCTCTGTGCTGCGTTTGTCACTTCTTGTTCTTGTTCCTCTGCTTCTCTCCCTCTTCTTTCTTGCACTCATGCCTAAGGAAACCGCCATGAAAACCTATGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACCTCAGTCCAAACTCGCTGAACTTGGAGTCTCAACTTGGAACAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTCCTTTAAAGAAGAAGAAACTATGTATCTGCTGGAGGGAAAAGTGAGGGTTACTGTTGAAGGATCTGTTGGGTCTTTTGAAATTGGGGGTGGTGACTTAGTTGTCTTCCCCAAAGGAATGAACATTACTTGGGAAGTGATTGAAGCTGTGAAGAAGCACTACAGCTTGAAAAAATAA 390 0.4385 MKLSVLRLSLLVLVPLLLSLFFLALMPKETAMKTYEVFGVKIEKNPPQSKLAELGVSTWNKWEGGPTKIPWSFKEEETMYLLEGKVRVTVEGSVGSFEIGGGDLVVFPKGMNITWEVIEAVKKHYSLKK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02388 129 Pfam EutQ-like cupin domain 51 125 IPR008579 -
Viun4g02388 129 CDD cupin_TM1112-like 58 127 - -
Viun4g02388 129 Gene3D Jelly Rolls 28 127 IPR014710 -
Viun4g02388 129 SUPERFAMILY RmlC-like cupins 49 125 IPR011051 -
Viun4g02388 129 PANTHER OS04G0445200 PROTEIN 31 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02388 Viun-Chr4 39265594 39267527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02388 K06995 - gmx:100807654 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02388 4 39265594 39267527 Viun4g02388 4 39265594 39267527 ECH