Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02378 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACACTGAAAATGGGTCAAAAGGCAAAAGAGCCAGCAGTTTCAGAGTTCATATCAGCACTAGCTGCTGGCAACAATGCGCACCAGATGGTTGTGGCATGTCCTGGTGCAGCAGACTCCATCACGCTGGCATTAGTCAGTGCTGCACATCAAACCGGTGGCCATGTTGTCTGCATTGTCTCAAGCCATGATGAATTAAATGCCTCAAAAAAGGTTCTTGGAGTGAATGCCAGTGAAGTTCAGTTCATTGTTGGAGAGGTTCAACAAGAACTACTTTTGTTGAGGCAAGCAGATTTTGTGGTGATTGATTGCAACCATGTGAGCCATGGAGAGATTGTTAAGGCAATCCAAGATGGTGGCATGCAAAATGGTGCAGTTGTTGTTGGCTGCAATGCACTCAGCTGCAGAGGGTCATGGTGGTCTTCTGGATCAAGAACCCAGTTGCTGCCTATAGGAAAAGGGCTTCTGGTGACAAGATTTGGAGCAAGTGCTGCAAGTCCGAAACATGGATCTGGAGTGAGTAAGACCAGAAGTAGTCGTTGGATTGTTAAGGTAGATAAATGCACTGGTGAAGAACATGTGTACAAGATCAGAGTTCCACAGGGAAAAGTGATTCAAGCTTGA 666 0.4625 MACWSAENATKAYLNTLKMGQKAKEPAVSEFISALAAGNNAHQMVVACPGAADSITLALVSAAHQTGGHVVCIVSSHDELNASKKVLGVNASEVQFIVGEVQQELLLLRQADFVVIDCNHVSHGEIVKAIQDGGMQNGAVVVGCNALSCRGSWWSSGSRTQLLPIGKGLLVTRFGASAASPKHGSGVSKTRSSRWIVKVDKCTGEEHVYKIRVPQGKVIQA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02378 221 PANTHER DUF1442 FAMILY PROTEIN 3 210 IPR009902 -
Viun4g02378 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Viun4g02378 221 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02378 Viun-Chr4 39216216 39217492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02378 - - gmx:100805528 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02378 4 39216216 39217492 Viun4g02378 4 39216216 39217492 ECH
Viun4g02378 4 39216216 39217492 Viun7g02420 7 28234594 28235660 PCT