Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02377 ATGGGAAACACCTTCTGTTTCTTTTGTGGATGCGTCGCTCAATCTAGCGTCGGCGTCGTCGAACAGTGGGGTCGCTTCCACCGCCTTGCGCAACCTGGTTTCCACTTTTTCAATCCTCTCGCCGGCGAATGCCTCGCCGGAATCCTCTCCACCAGAATCTCCTCCCTCGACGTCCGCATCGAGACCAAAACCAAGGACAATGTGTTTGTGCAGTTGCTGTGTTCAATTCAGTACCGAGTGATTAAGGAAAACGCGGATGATGCTTTCTATGAATTGCAGAATCCTCAGGAGCAGATCCAGGCTTATGTTTTCGATGTGACACGTGCTATTGTTCCGAGAATGAACTTGGATGAGCTCTTTGAGCAGAAGGGCGAGGTTGCCAAAGCTGTCTTGGAGGAACTTGAAAAGGTGATGGGAGAGTATGGGTATAATATAGAGCACATACTCATGGTTGATATTATACCCGATCCTTCTGTGCGTAAGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCAACTTGCAAGTGAGTACAAAGGAGAAGCTGAAAAGATATTGCTAGTTAAAAAGGCAGAAGCTGAAGCTGAGGCCAAGTATTTGGGTGGGGTTGGTGTGGCTAGGCAAAGGCAAGCTATTACAGATGGCTTGAGAGAGAACATCCTGAATTTCTCTCACAAAGTAGAAGGCACTAATGCTAAGGAGGTGATGGATCTTATCATGATAACTCAGTACTTTGACACAATCAAAGACCTTGGGAACTCATCAAAGAATACCACTGTTTTTATACCCCACGGACCTGGCCATGTTAGGGATGTTGGAGAGCAGATACGCAATGGACTGATGGAAGCAGCCAGTGCTCAAGTAAATGTGGAGGACTGA 879 0.4687 MGNTFCFFCGCVAQSSVGVVEQWGRFHRLAQPGFHFFNPLAGECLAGILSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKGEVAKAVLEELEKVMGEYGYNIEHILMVDIIPDPSVRKAMNEINAAQRMQLASEYKGEAEKILLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTNAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDVGEQIRNGLMEAASAQVNVED 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02377 292 CDD SPFH_like_u4 11 280 - -
Viun4g02377 292 SMART PHB_4 7 167 IPR001107 -
Viun4g02377 292 Gene3D Band 7 domain 46 169 IPR036013 -
Viun4g02377 292 Pfam SPFH domain / Band 7 family 14 183 IPR001107 -
Viun4g02377 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 287 - -
Viun4g02377 292 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02377 Viun-Chr4 39198868 39202144 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02377 - - gmx:100804986 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02377 4 39198868 39202144 Viun4g02377 4 39198868 39202144 ECH