Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02375 ATGCCCCAAAACGACACCCACTCCCACCAAAACGGTGAAACCACCGTCACCACCCCACTACACCCTCCACTTTTGACGCTCCACCTCCAAGCCATGACCTCAACCACCTCAACCTCCACCGACCCACTCCCATCAGACGACGGCGCCGCCGTGAGGGCAGTCAACAAACGGTTCGAAGGGCTCCTCACTGTGCGGACCAAGGCCATCAAAGGCAAGGGAGCCTGGTACTGGGCACACCTCGAGCCCATACTCGTCCCGCACCCGGACACAGGCCTACCCAAATCAGTGAAACTCAAATGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCAAACCCTTCAAGAACGGCTTCCGAACACTTAAAGCGTGGAACTTGCTCCAACTTCAGCTCCGGTTTGAGACCGGGTTCGGTCCCTTCTCCCCTCCCCATTTCCTCCATCACTCCCGGTTCGAACCGCAAAAGGGGTTCGCCTCAAATGGGTGCCACGTCACCCTCTTCTTATCAAAATCACTCCTTGGCCTTGGTCGAGTCTTCCCGCTTCGACATGGGGTACACCCAGATGCAGAACAGTAACAACAACAACAGCAATAGTAATAATAATAATAACAACAACATTATGCACTTGCAGCATCACGGGCAGAGCCAACAGCATTTAATGTTGTCGGGTGGGAAGGATGATTTGTGTGCTTTGGCCATGTTTGAGGACAGTGTGAAGAAGTTGAAGAGTCCCAAGACGTCTCCTGGTCCTGCTCTGAGCAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGATTGGTTCTATGAGACCTGCGGTTCTGTGTCCTTGTTGAGTCTGGAACATAGAAAGTTTCAGGCTTTTTTGAGCCAGGTTGGGTTGCCCGCCAATTTGAGGAGGGAGGTTTCTGGGGGGAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCTAGGATTAGGGACGCCATGTTTTTTCAGTTGGCGAGTGATGGGTGGAAGAGTGGGGGTTTGTTTAACTTTAACTCGTGTTGTGGTGGGGGGGAGAGTTTGGTGAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCTGTGTTCACTGGTGGAGTGGAGAATTCTAAGTATGCCGAGGAGGTTTTGTGGGAGACGGTTACTGCGGTTACTGGGAGTGTTGTCCATAGGTGTGTGGGGATAGTCGCAGATAAGTTCAAGGCTAAGGCGTTGAGGAACTTGGAGGCACAGCACCATTGGATGGTGAACACTTCCTGCCAGCTTCAGGGCTTGGTTAGCTTGATCAAGGATTTTAACCGCGAGTTGCCGCTTTTCAGGTCTGTGATCGAGAATTGCTTGAAGGTTGCGAATTTCATGAACAGTGAGTCGCAGGTGAGGAGTCTTTTCCTGAAGTGCAGGGTGCAGGAGATGGATTGTGGCGGCCTAATTCGCGTGCCTTCACCCAAATGTGATCCGTTGAAGAATTTTCAACTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCCAGAGTGATGCAGATGGTTGTGATGGAGGATGGGTTTAAGGTGATGTGTATGGAAGATACTTTGGCGAGGGAGGTTGCAGGGATGGTGCAGAATGAGGGGTTTTGGAACGAGTTGGAGGCGGTTTATTCACTTGTGAAGCTTGTTAGAGGGATGGTGCATGATGTTGAGGCTGAGAGGCCATTGATGGGTAGGTGCTTGCCTCTTTGGGAGGAGGTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTTCAACATTGTGGAAGGAGCTGTGGAGAAGATAGTTGAGAAGAGGTTTAGGAAGAATTATCACCCTGCTTGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGATTAAGGATGCAAGTGGAAAGTATCTTCCTCCTTATAAGTGTTTGACGCGAGAACAGGAAAAGGATGTGGACAAGTTACTGACGAGGCTGGCTTCGAGAGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGATGGTCTTGATCCGCTTTATGCACAGGCTGTTCAGATGAAGCAGAGAGATCCTGTAACAGGGAAGATGAAAGTTGCAAATCCACTGAGTAGTAGGCTTGTGTGGGAAACATGTTTGAGTGAGTTTAAATCCTTGGGGAAGATTGCAGTGAGGCTTATTTTTCTGCACGCAACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACAGTCAAGAGTTGCCTTGGAGAGGGCTCAGAAAATGATATACATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAGAAGGATGCAGAGCTGTTTGCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTTTATGCTGATGCTCCCTTAGTAGTTGGAATGGCTTGA 2445 0.4978 MPQNDTHSHQNGETTVTTPLHPPLLTLHLQAMTSTTSTSTDPLPSDDGAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGATSPSSYQNHSLALVESSRFDMGYTQMQNSNNNNSNSNNNNNNNIMHLQHHGQSQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYETCGSVSLLSLEHRKFQAFLSQVGLPANLRREVSGGRLDARFGEAKAESEARIRDAMFFQLASDGWKSGGLFNFNSCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWETVTAVTGSVVHRCVGIVADKFKAKALRNLEAQHHWMVNTSCQLQGLVSLIKDFNRELPLFRSVIENCLKVANFMNSESQVRSLFLKCRVQEMDCGGLIRVPSPKCDPLKNFQLVFPMLEDILSCARVMQMVVMEDGFKVMCMEDTLAREVAGMVQNEGFWNELEAVYSLVKLVRGMVHDVEAERPLMGRCLPLWEEVRSKVKEWCGKFNIVEGAVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKFSANKQSRVALERAQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLVVGMA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02375 814 MobiDBLite consensus disorder prediction 1 21 - -
Viun4g02375 814 MobiDBLite consensus disorder prediction 184 204 - -
Viun4g02375 814 SUPERFAMILY Ribonuclease H-like 394 775 IPR012337 -
Viun4g02375 814 MobiDBLite consensus disorder prediction 1 22 - -
Viun4g02375 814 MobiDBLite consensus disorder prediction 111 168 - -
Viun4g02375 814 PANTHER OSJNBA0013A04.12 PROTEIN 54 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02375 Viun-Chr4 39181582 39186915 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02375 - - gmx:100814598 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02375 4 39181582 39186915 Viun7g02421 7 28249208 28254476 ECH
Viun4g02375 4 39181582 39186915 Viun4g02375 4 39181582 39186915 ECH
Viun4g02375 4 39181582 39186915 Viun7g02421 7 28249208 28254476 PCT