Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02365 ATGGCTTCCATCCCCACACTTTCTCCATCCTTACCCAAACTCTTCCCTCACTCCACACCTCATTCCAACTCCAACCACTGCACTCTTCCTCCAACCTCTCTCTTCGGCACCAGGATCACCCTCCAACGCGCCACCTCATCATCATGTTCCCTCCCCAATACCAATTGCCGTGCCACGTCAGCAACGGTGTCGTTTAGCCTCCCCTCCCCGAAACCCCTTTCTGACGCGCCAGAGAAAACCCCAAAGTGGTCGGCGAGGGCTATAAAATCGTATGCAATGGCAGAATTGGAGGCGAGGAAGATCAAGTTTCCCAACACGGGAACCGAGGCTATTCTGATGGGGATTTTGGTTGAAGGAACAAGTAGAGCTGCTAAATTCTTAAGAGCTAATGGAATTACACTTTTCAAAGTACGTGAAGAAACTTTAAATCTACTTGGCAAATCTGACTTGTATTATTTCAGCCCTGAACATCCTCCTCTGACTGAACCAGCCCAGTTAGCCCTTGAATGGGCTATTCAGGAGAAACTGAAATCAGGTGAAGGAGGAGAAATAAACGTGACACATATGCTTCTAGGAATTTGGTCACAAAAAGAATCAGCAGGTCAAATAATTTTGGCTTCTCTGGGTTTCGATGATGAAAAAGCCAAAGAACTTTCCAAAACAATTGATGGAGATGTTGATTTGAGTTTCAAAAGGCAAACATAA 705 0.4582 MASIPTLSPSLPKLFPHSTPHSNSNHCTLPPTSLFGTRITLQRATSSSCSLPNTNCRATSATVSFSLPSPKPLSDAPEKTPKWSARAIKSYAMAELEARKIKFPNTGTEAILMGILVEGTSRAAKFLRANGITLFKVREETLNLLGKSDLYYFSPEHPPLTEPAQLALEWAIQEKLKSGEGGEINVTHMLLGIWSQKESAGQIILASLGFDDEKAKELSKTIDGDVDLSFKRQT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02365 234 MobiDBLite consensus disorder prediction 1 29 - -
Viun4g02365 234 Pfam Clp amino terminal domain, pathogenicity island component 104 146 IPR004176 -
Viun4g02365 234 Pfam Clp amino terminal domain, pathogenicity island component 183 217 IPR004176 -
Viun4g02365 234 SUPERFAMILY Double Clp-N motif 82 221 IPR036628 -
Viun4g02365 234 Gene3D - 82 229 IPR036628 -
Viun4g02365 234 ProSiteProfiles Clp repeat (R) domain profile. 77 225 IPR004176 -
Viun4g02365 234 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 17 230 IPR044217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02365 Viun-Chr4 39112992 39116269 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02365 - - var:108344079 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02365 4 39112992 39116269 Viun4g02365 4 39112992 39116269 ECH