Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02282 ATGGGCGCTGGTGTTTCCACAAGTGCCGCGGAAAACGATGAAGTTGGCACCTTTTCTTTGTCCTCCCCACAGGCGACAACCTTTGATGATGTTCCTGAGAACTGCATCTCTTCTCTGATGATGAGTTTTGATCCACAAGAGATTTGCACATTGGCCAGAGTGAACAAAGCCTTCCACAGAGCTTCTTCTGCAGACTTTGTATGGGAATCAAAGCTGCCCTCAAACTATCAACTCCTTCTCAAAAAAGTACTCGGTCAACACACCGATCTTTCTTCCATCACCAAGAAAGAGATCTATGCCAAACTTTGCACACCCAATTTCTTCGACCATGGCACCAAGGAGATTTGGCTTGACAGATGCAGTGCACAAGTTTGTTTGTTCATTTCTTCAAAAGCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATTATGTTCCGACTGAGGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAGATGTGGTGGGTTGAAGTAATGGGGGAACTAGAGTTTGAGTTTCCAAAGGGAAACTATAGTGTGTTTTTCAAGCTTCAATTGGGGAAGCCCACAAAGAGATTGGGCCGGAGAGTATGCAACCTTGATCAAGTTCATGGATGGGACATCAAGCCCGTCAGATTTCAGCTATCTACATCCGACGGTCAGAGTTCACTCTCGCAGTGTTATCTGCGTGGGCCTGGAGAATGGGCCCACTATCATGTTGGGGACTTTGCAGTTGAGAAGCCCAATGAGCCAACAAACATAAAGTTTTCTTTGGCCCAAATTGATTGCACGCACACCAAAGGTGGGCTTTGCATAGATGGGGTAGTGATTTGCCCAAAGGACTTTTCAGAAAGACTGAAACAGATTTAG 879 0.4494 MGAGVSTSAAENDEVGTFSLSSPQATTFDDVPENCISSLMMSFDPQEICTLARVNKAFHRASSADFVWESKLPSNYQLLLKKVLGQHTDLSSITKKEIYAKLCTPNFFDHGTKEIWLDRCSAQVCLFISSKAFKITGIDDRRYWNYVPTEESRFKSVAYLQQMWWVEVMGELEFEFPKGNYSVFFKLQLGKPTKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQSSLSQCYLRGPGEWAHYHVGDFAVEKPNEPTNIKFSLAQIDCTHTKGGLCIDGVVICPKDFSERLKQI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02282 292 Pfam Phloem protein 2 124 282 IPR025886 -
Viun4g02282 292 PANTHER F-BOX PROTEIN PP2-A15 14 289 - -
Viun4g02282 292 SUPERFAMILY F-box domain 21 102 IPR036047 GO:0005515
Viun4g02282 292 CDD F-box_AtSKIP3-like 28 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02282 Viun-Chr4 38335922 38339079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02282 - - gmx:100816360 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02282 4 38335922 38339079 Viun7g03314 7 35113156 35116223 ECH
Viun4g02282 4 38335922 38339079 Viun4g02282 4 38335922 38339079 ECH
Viun4g02282 4 38335922 38339079 Viun7g03314 7 35113156 35116223 PCT