Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02252 ATGCGAGTCTTCGCTTGTCGAGCCTCCAACTTCTTCAAGCGCAATCTCGATAATTTCCCGTACAACCCTAATTTCAATTTCTTCCGAGAATTCGCGCAATCCACCGCAATCCCCAAAAAGCAACTTAGGGTTCGTGACCATGGCTACGACAACTACATGGAAGTGGAGAAGAAAACGCGCAAGGTCCTCAAATTTCAGAGCATCATCCTCCCCGAGCCCACCCAATCGCTCCCAATCTCGCGCCTCGAAACCCTTGTGCGCCGCTTCGGTTTCACGCGCCACGAGGCTGGTGCGTTCGTCCTCAAGTTCCCGCACGTCTTCGAAATCTTTGAGCACCCCGTCCAGCGCATTCTCTTCTGCCGCCTCACCCGCAAAGCCATTCTCCAGATCCAGCAGGAGCGCCAAGCGCTCGCGGAGCAGATTCCACGCGCCGTCACTCGGCTTCGGAAGCTTCTGCTGATGACGAACGAAGGCAGGCTCCGCCTCGAGCACGTGCGCATCGCACGCTCCGCCTTCGGGCTTCCCGACGACTTCGAAAACTCGGTGGTTCTGAGGTACCCTCAGTTTTTCCGTTTGATTGATGCAAAGGAAACTAGGATGAAGTACATTGAGGTTGTGGATCGGGACCCTAGGTTAGCAACTTGCGCGATTGAGGAGGTTAGGGAGAGGGAGTATAGACAGAGAGGTGGTGATGCTGAGGATATTAGGTTTTCTTTTATCATTGATTTTCCACCTGGTTTTAAGATAGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGCTTCCTTATTGGTCCCCATATGAGAATGTTTGTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGAGCTGTTGCCACCATTCATGAATTGTTGTCGTTGACTGTGGAGAAGAAGATTACATTGGAGCGGATCGCACATTTCCGGATGGCGATGAACCTGCCCAAGAGGTTGAAGGATTTCCTGCTCCAGCACCAAGGTATTTTCTATGTCTCCACCAGGGGGAATCAGGGGAAGCTTCACACTGTATTCCTTAGGGAAGCGTATAGGAAAGGCGAGCTGATTGAGCCGAATGAGTTGTATTTGGCACGGAGGAAGCTAGCTGAGCTTGTGCTCTTGAGTCCACGGAAAGCCAAGGTTGATAAGGAGTTGGTTGGGTACAGGAGAAGCAGGTTAGAGGACGAAATGGGGCAGGTAACGAGGACGTATGTGGAGGATGCTTGTGAAGATTTTAAGGGGGAAGATGGTGTGGGGCTGGATAAGGATGCAGAGGATGATTTGACGTCAGATATAGGTTCTGATGTTGATTTGGGAGATGAGGGTAATGATTTTGTGGATAGTGCATCACTGCAAAGGACATCATAG 1383 0.5076 MRVFACRASNFFKRNLDNFPYNPNFNFFREFAQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSIILPEPTQSLPISRLETLVRRFGFTRHEAGAFVLKFPHVFEIFEHPVQRILFCRLTRKAILQIQQERQALAEQIPRAVTRLRKLLLMTNEGRLRLEHVRIARSAFGLPDDFENSVVLRYPQFFRLIDAKETRMKYIEVVDRDPRLATCAIEEVREREYRQRGGDAEDIRFSFIIDFPPGFKIGKYFRIAMWKWQRLPYWSPYENVCGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKRLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDKELVGYRRSRLEDEMGQVTRTYVEDACEDFKGEDGVGLDKDAEDDLTSDIGSDVDLGDEGNDFVDSASLQRTS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02252 460 Pfam Plant organelle RNA recognition domain 44 380 IPR021099 GO:0003723
Viun4g02252 460 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 32 399 IPR045040 GO:0003723
Viun4g02252 460 MobiDBLite consensus disorder prediction 420 460 - -
Viun4g02252 460 MobiDBLite consensus disorder prediction 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02252 Viun-Chr4 38205840 38209894 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02252 - - gmx:100782167 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02252 4 38205840 38209894 Viun4g02252 4 38205840 38209894 ECH