Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02216 ATGTTTAAGTCATGGAGCAAGAAAAACAAGACTAAAGCTGTATTCAAACTGCAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGTCTGCACTGAAGGTAGCTTTGGTGCCCGATAATGTTGGGAAGCCTACGGTGAAACTAGAGAAAGTTGCTGTGCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCAGTAAAATTTGTTAGGGACGCAAAATCAGGAAAACTTCAAGAGAAAATCTACCATTTTGTTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAATCCTCAATTGACTTTGCTGATTTTGCTGCAGAAACTGAGCCACTGACGGTGTCCTTACCTCTGAAGTTTGCCAATTCAGGCGCAATCCTACATGTGACAATTCAGAACGTGGAAGGGGTACAAAGAGATCAAAGAAACGGGGAAGATTATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCAGATGAAAACTCTCGTAATGTTTATGAAGATTTTCCCAAGCTATTACCACCCTTGAGGCAGAATTCAATGCCGTGCAAAGGAACTATCGAGGCCATTGCAACAAGAGCTCAAATGCATAGGGGGTCACTGGGTTCAGCATCAGATAGGAGTTTAGGTGACTCCTGGAGAAACAGCCTGGAAGATACTCATCCTCGAGAAACATTACAAGAGCCTTCAGATAATGTCATTGAGAACCTTAGAAGCGAAATTGCTTCTCTGAAGAGGAAAGCCGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGATGGAGAAGGAATGCAGTCGAGGACAAAGTATGTCAAGACAAATAATCAGCCTCAGAGACGAGAGAAATATGATCAAAACTAAATATGAGCAACTAATGTCGCAGCAAAACCTCATTAACGAGACCAAAAATTCAAAAGCCTTACAGACTGAGATTGAACAAGCTAGGCAGCAGTTAGAAGCAATAAAAGAAGAGCTTGCTTATGAAAAAGAGTTTAGTTCTAATCTTAAATTGCAACTCCAGAAGACACAATACTCAAACTCCGAACTACTTTTAGCAGTTGGAGAACTTGAAGCAATGCTGGAACATAAGAATAAGGAATTGTTGGACAAAACTAAAGAGCATGATGATGCCACAGAATTAGGTCACTTGAAGCAGAAAATTGCAGACCTGAATGGTGAAATAGACATTTATTATAAGCAACGTGATGAGCTAAATGAGCAGATAAAAGAGCTCAACTTTGAGTGTGAGAATCTGAAGAAAGAAAACCTGGATATCTCTTTGAGATTAAACCATAAAGAAGCACAACAAATTGCGTTACAAAATAAATATTCAGCTTCTTTGGCAACTATAAAACAACTTGAATCTCAAGTACAGAGATTAGAAGAAAAGATAGGGAAGCAGGTGGATGATTTTTCAGGGTCTTTGATTTACATCAATGAACTTGAAAATCAAGTCAGTGATTTGAAGAGAGAAATGAAAGTACAAGAAGAAGATTATCAAAAAGATTTCCAAGCCATGAAATGTGCAAAACTTGAACAGGAAGAACGGGCCATCCAAGCAGAGGAGACCTTGATAAAGACTATACACAACAATGATCTCGCATGTCAGCGTTTTGAGGATGAATATAGAAGTCTTTCAGCTGAAATGACATTGAAAGCAGAAGAAAACGAAAAGAAGGTCATGGAAGCTTATGCAGAAGCTGATGAATTGCAGAAGCAGAACAAACTCATGGAAGAAGTTCTCCAGAAATGCAATCAAGAGCTCAGGCTTATTACAAATCAGAATGAATTGAAACTTCAACAGCTCTTGAACCAAATAGATTCAAAAGAAAAGAAAGTGGAAATGATGTCTCAAGAACTAGAGATTAAGTCCAAGCAACTTGAAGATGTACAAAGGCACAGGGATGAAAAGGATAAGGCATTAACAAAGCAAATTCAATTGCTCAGAATTGAAATTAGAAAGCTGATGCTAGAAGAGCATGATCCAACAGAGCTCGTGACTATGTTGTTAATGCAAGAGAACAACGATGAGGAGATAAGGTTTGACACCCTAACGTCAGCATTAGAAATCTTTAAGACCCAGCACAATGAATTAAAACATAACTTGCACGTTGAACAAGCAGAAAAAGAAAATATGAAGGAAAAAATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGTAGAAGAAATAAGTGCTGTAGAAAAGAGGCTCAAAAATAGCAAAGGACCAACAACGGCCAAAAGTATGAATTTGGCTTCATGGAACTACGAGACTGCTGCATCTTGTTCATCCACTAAGGAAAACAATAAGAAGTCAGGATCGGAAATGCAGATGGGAATGGATGATGCAAACTCCCCTGTTGGAAAGTCTGAAGAAGGAAGAACCATATGCAATTCAGCTGAGAACGAATTTCATCTAGCTTCACACAGAAGTGACGTGAAAACTTGCTTGGAAAATAAGGCTATTGTCTTCAATTATGATGATGCTGGTTATTGTCCTACAAATGAGTTGTTGGATGAAGTGGCAGTACTAAAGGAAAGGAACAAATATATGGGAACTCAGCTGAAAGAAATGGAAGAGAGATATTCTGATATTAGTCTTAAGTTCGCAGAGGTGGAGGGAGAAAGACAACAGCTTGTTATGGCCCTACGGAATATGAGGAATGGTAAGAACTAG 2700 0.3893 MFKSWSKKNKTKAVFKLQFQATQVPKMKKSALKVALVPDNVGKPTVKLEKVAVQDGTCSWENPIFESVKFVRDAKSGKLQEKIYHFVVSTGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVTIQNVEGVQRDQRNGEDYGNGSSRHLLSICSADENSRNVYEDFPKLLPPLRQNSMPCKGTIEAIATRAQMHRGSLGSASDRSLGDSWRNSLEDTHPRETLQEPSDNVIENLRSEIASLKRKAEESELELQSLQKLMEKECSRGQSMSRQIISLRDERNMIKTKYEQLMSQQNLINETKNSKALQTEIEQARQQLEAIKEELAYEKEFSSNLKLQLQKTQYSNSELLLAVGELEAMLEHKNKELLDKTKEHDDATELGHLKQKIADLNGEIDIYYKQRDELNEQIKELNFECENLKKENLDISLRLNHKEAQQIALQNKYSASLATIKQLESQVQRLEEKIGKQVDDFSGSLIYINELENQVSDLKREMKVQEEDYQKDFQAMKCAKLEQEERAIQAEETLIKTIHNNDLACQRFEDEYRSLSAEMTLKAEENEKKVMEAYAEADELQKQNKLMEEVLQKCNQELRLITNQNELKLQQLLNQIDSKEKKVEMMSQELEIKSKQLEDVQRHRDEKDKALTKQIQLLRIEIRKLMLEEHDPTELVTMLLMQENNDEEIRFDTLTSALEIFKTQHNELKHNLHVEQAEKENMKEKISQLEGELKKKVEEISAVEKRLKNSKGPTTAKSMNLASWNYETAASCSSTKENNKKSGSEMQMGMDDANSPVGKSEEGRTICNSAENEFHLASHRSDVKTCLENKAIVFNYDDAGYCPTNELLDEVAVLKERNKYMGTQLKEMEERYSDISLKFAEVEGERQQLVMALRNMRNGKN 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02216 899 Coils Coil 305 339 - -
Viun4g02216 899 Coils Coil 561 641 - -
Viun4g02216 899 Coils Coil 519 539 - -
Viun4g02216 899 MobiDBLite consensus disorder prediction 218 234 - -
Viun4g02216 899 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 842 898 - -
Viun4g02216 899 MobiDBLite consensus disorder prediction 770 787 - -
Viun4g02216 899 MobiDBLite consensus disorder prediction 770 801 - -
Viun4g02216 899 Coils Coil 486 506 - -
Viun4g02216 899 Coils Coil 395 443 - -
Viun4g02216 899 Coils Coil 703 744 - -
Viun4g02216 899 MobiDBLite consensus disorder prediction 203 235 - -
Viun4g02216 899 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Viun4g02216 899 Coils Coil 863 883 - -
Viun4g02216 899 Coils Coil 240 274 - -
Viun4g02216 899 Coils Coil 451 478 - -
Viun4g02216 899 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02216 Viun-Chr4 37873491 37878548 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02216 - - pvu:PHAVU_004G116900g 1442.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02216 4 37873491 37878548 Viun7g03271 7 34902363 34907609 PCT