Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02207 ATGTCTAATATGATAGAGGTGAGAGTCCCAAATCTTGATTGTGAAGGATGTGCTTCAAAACTAAAGAAAGCTCTCTTCAAACTCAAAGGAGTAGATGAGGTAGAAGTTGAAATGGAATCACAGAAAGTAACAGTGAGGGGTTATGGATTGGAGGAAAAGAAGGTTCTGAAGGCAATAAAACGTGCAGGGAAAGTGGCAGAACCATGGCCATTTCCAGGACATGCTCATTTTTCTTCATTTTACAAGTACCCTAGTTACATTGTTAACCATTACTATGATGCATACAAAAGTGAAGCTACCAATGGAGTTCACACTTTCTTCCACACCCCTGCAGTGTATTCAGTTGCTGTGGCATCTGATGAAGCTTTTGCTTCTCTCTTCAGTGATGATAACCCTCATGCTTGCACTATAATGTAA 417 0.4005 MSNMIEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMESQKVTVRGYGLEEKKVLKAIKRAGKVAEPWPFPGHAHFSSFYKYPSYIVNHYYDAYKSEATNGVHTFFHTPAVYSVAVASDEAFASLFSDDNPHACTIM 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02207 138 CDD HMA 6 67 IPR006121 GO:0046872
Viun4g02207 138 SUPERFAMILY HMA, heavy metal-associated domain 4 69 IPR036163 GO:0046872
Viun4g02207 138 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Viun4g02207 138 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 5 135 IPR045181 GO:0046872
Viun4g02207 138 Gene3D - 2 66 - -
Viun4g02207 138 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02207 Viun-Chr4 37775844 37778247 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02207 - - gmx:100802676 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02207 4 37775844 37778247 Viun4g02207 4 37775844 37778247 ECH