Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02204 ATGCAAGAGGACAACGGATCGGGGCATTTTCGTCATTCCAGTAAGGAGGGAATGTGGTTGCCGATCATAAAATCTCTGCCGCGGTCCGCGGTGGTTCTCGTCTTCCCCGTCGTGGTCATCGTCGGCGTGTTGGCTTACACGCGCGTGATCGACACACCTCCTACACTTTCTGGAATTTCATCTACCAAATCTGCATTGAGCACCAAAATCCCTTTCAGTATTCAAAGAGAGACTCCATTGAACTGCGGTGTATACAACCTCACAAGAACATGCCCCACCAATCAAAACCCAATCCAACAGGATGATCAGAGCCGTTCATCCAGCGCCACGTGTCCAGAGTACTTCCGTTGGATCGACGAGGATCTGAGACCGTGGGCCCACACAGGCATAACACAAGAGATGGTGGAGAGGGCAAAGGCAACGGCAAACTTCAAGTTGGTGATATTGAAGGGTAGGGCTTATCTGGAGACCTACCAAAAGTCCTTCCAAACAAGGGATGTCTTTACATTATGGGGCATTTTGCAGTTGTTAAGGAGGTACCCTGGAAAAGTTCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCTGTGGTTCTGGCTAACCAATATAGTGGTCCTGTTTCTCAGCAGCCACCACCGTTGTTTCGATATTGTGGCAATGATGATACCTTGGACATTGTCTTTCCTGATTGGTCTTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAAGGGAACAAGAGAATACCATGGCTCAACAGAGAGCCTTATGCATATTGGAAAGGTAATCCATCTGTTGCAGAAACCAGAGAAGACCTCATGAAATGCAATGTTTCTGAGAATCATGATTGGAATGCTCGTTTATATGCTCAGGATTGGAAACGAGAAACAGAAGAAGGGTTTAAGAAATCAGACTTGGCAAACCAATGCACTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATATATCCTGGCATGTGACTCCACCACTCTACTTGTGAAACCACATTACTACGATTTTTTCACCAGAGGACTCATTCCAGGGCACCACTATTGGCCCATTAAGGAAGATGACAAGTGCAGGTCCATCAAGTTTGCAGTAGATTGGGGGAACAGTCACAAGCCAAGGGCACATCAAATTGGAAAGGCAGCAAGTGAATTCATTCAAGAAGAGTTGAAGATGGATTTTGTGTATGATTACATGTTTCATCTTCTGAATGCATATGCTAAACTGTTTACTTACAAACCCTCCATTAGTGGAAATGCTACTGAACTGTGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGATCGGAAAAGAAATTTATGATGGAATCATTGGTGAAGGGTCCTGCAGACACCGACCCTTGCACCATGCCTGCACCTTTTGATCCTCCATCTTTGTACGCACAATTACAGAGAAAGAAAAATTCAATTGAACGAGTTGAATCATGGGAGAGAAGTTACTGGCAGAATCAAAACATAACATCTTAG 1542 0.4475 MQEDNGSGHFRHSSKEGMWLPIIKSLPRSAVVLVFPVVVIVGVLAYTRVIDTPPTLSGISSTKSALSTKIPFSIQRETPLNCGVYNLTRTCPTNQNPIQQDDQSRSSSATCPEYFRWIDEDLRPWAHTGITQEMVERAKATANFKLVILKGRAYLETYQKSFQTRDVFTLWGILQLLRRYPGKVPDLELMFDCVDWPVVLANQYSGPVSQQPPPLFRYCGNDDTLDIVFPDWSFWGWAEVNIKPWEILLGELKEGNKRIPWLNREPYAYWKGNPSVAETREDLMKCNVSENHDWNARLYAQDWKRETEEGFKKSDLANQCTHRYKVYIEGSAWSVSEKYILACDSTTLLVKPHYYDFFTRGLIPGHHYWPIKEDDKCRSIKFAVDWGNSHKPRAHQIGKAASEFIQEELKMDFVYDYMFHLLNAYAKLFTYKPSISGNATELCVESMVCGAEGSEKKFMMESLVKGPADTDPCTMPAPFDPPSLYAQLQRKKNSIERVESWERSYWQNQNITS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02204 513 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 69 507 - -
Viun4g02204 513 SMART cap10 183 432 IPR006598 -
Viun4g02204 513 Pfam Glycosyl transferase family 90 107 502 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02204 Viun-Chr4 37754807 37760005 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02204 - - gmx:100789969 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02204 4 37754807 37760005 Viun4g02204 4 37754807 37760005 ECH