Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02159 ATGGCTTCCTTCACGTGCTCCCCCACCTCCCTCCAGCTTCGATTGGCCTTCGCCGCACCCAAATTTCCCCTTACTCCGCACTTGCGAATGCGCAACCTCAACAAGAATCGCGTTCGCCCTTTACGCGCCGAGCGGGACGGCGCCGCCTCGGAGTGGACCGGGTCCGGACCCAACCTCGACGGCTTCTCCGGCTGGTCCGACACCGACGCCGAGCAACAGACCGACAAGAAGAAGGAGTCCTATGGAGGAGTTGTGGGAGTAGGAGTGGCTGGAGTGCTTCTTCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTTGGCAAACAAACCGGTTCCAGACCAGAGCAGCACATGAAGCCCTTGACTACCCAGCAGGAGGAAATTTTGTCTTCTGATGATCATAATAATGAAACAACAGAACCAGAAAATGTTGATAAGGTGGAGCAAGGAAATGATAAAATAGAAGGAGATCTGCCCAACTACGATGGTGCTAAACCACCCCACCTTAATGCTGTTCAGCATGATGAAATAACCAGTTCAAGTGGAAGTGTTAGTTTTGGTTTTAGCGAAACCTATTCTAGTTCAGGTGCTGATAACGAGACTGAAATTGTTAGTGTTGTGGTCAGTCCTGAGTCAAATAACACGATTTCAGATCATAAGTTTTTCAATGAAGCTGTTGAAGAAAATATTCTGTCAGCTTCAAAGAAAGAAAGCCTTGATCTGAACAAAATTCCGCAGGTCTCTGCTGAGGGAAATGAGCCATCCCTTGAAGAGTGGAGCATTCCTGGAAATGACGTGTTTGAAAAATCATCTGTTTTATTATCAGCCAATGCACTGGTAGATGAGAAGGTTATAAATGATAGTTATGAGGTTGATGAAGTTAAATCTGAATCTCCAAATTTTGGATCCTTTTTCTCTGTTCCTGGTATTCCCGCTCCATCCGTAGTTTCTGCAACTGCACAAGTGTTTCCTGGAAAGGTTTTAGTTCCTGCAGCTGTTGATCAAGTCCAAGGGCAAGCACTAGCTGCATTGCAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACTCGTCGTGAATATGCTCGCTGGTTGGTGTCTGCTAGCAGCACACTTTCAAGGAGCACTGTTTCGAAAGTGTATCCGGCCATGTACATAGACAATGTTACTGAGCTTGCATTTGACGATGTCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAGAGCAGGCTTTCAAGACAAGATATACGGTTATCTGGTGATGAAGATGATAGTCCATTTTACTTCTCCCCTGGAAGTCCTTTATCACGTCAAGATCTTGTCAGTTGGAAAATGGCTCTGGAGAAAAGGCAGCTTCCAGAAGCTGACAGAAAGACACTGTACCAACTTTCTGGTTTTCTGGACGCTGATAAGATACATCCTAATGCATGCCCTGCCCTAGTAGCTGATCTATCTGCTGGCGAGCATGGAATAATAGCTCTTGCTTTTGGTTATACAAGATTATTCCAGCCAGATAAGCCTGTAACAAAAGCCCAAGCAGCTATGGCTCTAGCTACTGGAGAAGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATTGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCTCATAGTGCTTTAGTAGCTCAGGTAGAGAAGGATATCAATGCAAGTTTTGAGCTGGAGCTTTTATTAGAGAGGGAAAAGATCAATGCTGTTGAAAAAATGGCTGAGGAGGCAAGACTCGAGTTGGAAAGGTTAAGAGCTGAGAGAGAAAAGGATAACCTTGCATTGACAAAAGAACGAGCTGCTATTGACTCAGAAATGGAGGTTTTTTCAAAGTTAAGGCATGAGGCTGAGGATCAATTACAAATCCTTATGAATGACAAGGTAGAAATAGCACACGAAAAAGAGAGGATTAACAAACTCCGGGAACAAGCAGAAGTTGAAAACAAGGAGATTGCTCGTTTACAATATGAGCTAGAGGTAGAACGTAAAGCCCTGTCTATGGCCAGGGCTTGGGCAGAGGATGAGGCTAAACGAGTGAGAGAGCAAGCAATAGCCTTAGAGGAGGCTAGAGATCGTTGGGAGAGGCATGGGATCAAAGTGGTGGTTGACGATGACCTCCGCAAGGAGGCCTCCGCCGGAGTTACATGGCTCAATGCCTCAGAGCAGATTTCGGTTCAAGGAACAGTTGACAGGGCCGAAAACTTATTGGACAAGCTCAAACTAATGGCATCAGATATCAGAGGAAAATCTAGAGACATACTTGACAAAATCATCCACCTGGTCTCCCAATTTATATCAAAATTGAGGGAATGGGCATCCAGAACAGGAAAACAAGCTGAAGAATTTGGAGAAGCTGCCATATCAAAGGTAGGTAAGTCAGCCAGTGAGTTGCAACAAAGTGCTATCGAAGTTGGATTTGGTTTCAAAGAAGGTGCAAAGCGTGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACTCAAAAATTCACACAGAAGTTCAAGACCTGA 2562 0.4504 MASFTCSPTSLQLRLAFAAPKFPLTPHLRMRNLNKNRVRPLRAERDGAASEWTGSGPNLDGFSGWSDTDAEQQTDKKKESYGGVVGVGVAGVLLLSGLTFAALSLGKQTGSRPEQHMKPLTTQQEEILSSDDHNNETTEPENVDKVEQGNDKIEGDLPNYDGAKPPHLNAVQHDEITSSSGSVSFGFSETYSSSGADNETEIVSVVVSPESNNTISDHKFFNEAVEENILSASKKESLDLNKIPQVSAEGNEPSLEEWSIPGNDVFEKSSVLLSANALVDEKVINDSYEVDEVKSESPNFGSFFSVPGIPAPSVVSATAQVFPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSTLSRSTVSKVYPAMYIDNVTELAFDDVTPEDPDFSSIQGLAEAGLIESRLSRQDIRLSGDEDDSPFYFSPGSPLSRQDLVSWKMALEKRQLPEADRKTLYQLSGFLDADKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAMALATGEASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFELELLLEREKINAVEKMAEEARLELERLRAEREKDNLALTKERAAIDSEMEVFSKLRHEAEDQLQILMNDKVEIAHEKERINKLREQAEVENKEIARLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDDLRKEASAGVTWLNASEQISVQGTVDRAENLLDKLKLMASDIRGKSRDILDKIIHLVSQFISKLREWASRTGKQAEEFGEAAISKVGKSASELQQSAIEVGFGFKEGAKRVAGDCREGVEKITQKFTQKFKT 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02159 853 MobiDBLite consensus disorder prediction 124 143 - -
Viun4g02159 853 MobiDBLite consensus disorder prediction 44 78 - -
Viun4g02159 853 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 847 - -
Viun4g02159 853 ProSiteProfiles S-layer homology (SLH) domain profile. 393 470 IPR001119 -
Viun4g02159 853 Coils Coil 630 674 - -
Viun4g02159 853 MobiDBLite consensus disorder prediction 129 143 - -
Viun4g02159 853 ProSiteProfiles S-layer homology (SLH) domain profile. 475 543 IPR001119 -
Viun4g02159 853 Coils Coil 746 766 - -
Viun4g02159 853 Coils Coil 686 713 - -
Viun4g02159 853 Coils Coil 577 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02159 Viun-Chr4 37041827 37049775 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02159 - - aprc:113867512 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02159 4 37041827 37049775 Viun7g03243 7 34647991 34652752 PCT