Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02144 ATGGCAGTTGTGAAACCTGAGATGAAATCCTACATCTGGCTTCAAACTGTGGATGGTTCTATTCATCAAGTAGAGGAAGAGGTAGCCATGTTTTGCCCCATGATTTGCCAGGAAGTACTTCAAACAGGCATGGGATCTTCCAAAACTTGTGCTATATCTCTTCCACATCATGTCAATCCTGCAATCTTGGATATGATACTTGATTACTGTCGGTTTCACCAAGTACCAGGACATTCTAACAAGGAGCTCAAACTTTTCAATGAAAAGTTTGTTCGGATCGATACAAAGAAGTTATGTGAGTTGACATCTGCTGCTGACAGCCTCCAACTGAAGCCTATGGTTGATCTGACCAGTCGAGCCCTTGCTAGGATTATTGAAGGAAAAACTCCTGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTAACTGAGGAAGAGAAGCTGGAGCCTCTGAGAAACATAACTGATGATCCACGGATTCGACTTCTAAACAGATTGTATGCTAGAAAGAGGAAAGAACTACAAGAGAGAAAGAAACCGAAGGATGTTGCAGTTGAGGAGGAACCAAAGGATGAGCGTTCGGTTGAAGATCTTCTATCATTTATTAATGGCGCAGATGGAGAAATAAAGGGAACTAGAGCAAATAAAAATAAAAAGAAGAATAGAAGGAAAGACCAGACAAAGGATCTTTCTTCAAAAAATGCAAATGAAAACAATAAGGGGTTGAATCTTCTTCCTTCTGCATATCACAATGTCAATTTTGACAAGGCCTTAGAGGCCTCTTCAAGTAAACACTCAAGGATGCAAACCCTTCCAGATGTTAATTTTTCTCCAAAATTTGAATTTATTGATGGTGATGTTGACGATGATTTAGATCCTGCTGTGAAGGAGGAGCTTGACAGGGAAGTGGAAGATTTTGCACGAAGATTGAATTCAGATTGGCCTGAAAGGATGCAAATTTTATCTTTGGGTCAAGGCAGAAGACTGGTACCAATCTCTGTGAATGGCAATGGTTCAACGCACCTGTACACAAGTTTGTGTTGA 1047 0.405 MAVVKPEMKSYIWLQTVDGSIHQVEEEVAMFCPMICQEVLQTGMGSSKTCAISLPHHVNPAILDMILDYCRFHQVPGHSNKELKLFNEKFVRIDTKKLCELTSAADSLQLKPMVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELQERKKPKDVAVEEEPKDERSVEDLLSFINGADGEIKGTRANKNKKKNRRKDQTKDLSSKNANENNKGLNLLPSAYHNVNFDKALEASSSKHSRMQTLPDVNFSPKFEFIDGDVDDDLDPAVKEELDREVEDFARRLNSDWPERMQILSLGQGRRLVPISVNGNGSTHLYTSLC 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02144 348 SMART skp1_3 9 110 IPR001232 GO:0006511
Viun4g02144 348 MobiDBLite consensus disorder prediction 207 245 - -
Viun4g02144 348 SUPERFAMILY POZ domain 10 74 IPR011333 -
Viun4g02144 348 SUPERFAMILY Skp1 dimerisation domain-like 84 152 IPR036296 GO:0006511
Viun4g02144 348 Pfam Skp1 family, tetramerisation domain 12 74 IPR016073 GO:0006511
Viun4g02144 348 Pfam Skp1 family, dimerisation domain 111 148 IPR016072 GO:0006511
Viun4g02144 348 FunFam SKP1-like protein 21 isoform X1 6 156 - -
Viun4g02144 348 PANTHER SKP1 8 149 IPR016897 GO:0006511
Viun4g02144 348 Gene3D Potassium Channel Kv1.1; Chain A 5 155 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02144 Viun-Chr4 36956026 36963881 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02144 - - gmx:100808004 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02144 4 36956026 36963881 Viun4g02144 4 36956026 36963881 ECH