Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02115 ATGGCTTCCCACTACGAACTCCAAGTGAAGCTCGAGTCAGCGCGTGGATTAAAAAACGTGAACTGGCGCCACGGCGCGAACCGCCCTTACGCCGTCGTTTGGGTGGACGCTAAGAACAAGTGCTCCACCAGCGTCGACGAAGACGGCGACACCGAAGCCACTTGGGACCAAACCCTAGTTTTTCCTCTTCCTCCTGAGCCTCTTGAGAATCTGACGCTCCATGTCGACGTGGTTCACGCCGGCTCCGAGGAGGACATCGAGCCGATCATCGGCTCGGCTCGGCTCAAATTAGTTGAAGTTCTTGAAGAAGTTGGAGTTGGAGCGCGCGTGCCCCGCACTCTCTCACTGAAGCGCCCTTCGGGAAGACCCCAGGGGAATGTGGACGTTAATGTCGTTATAAGGGCGAGTGGTGGCTATCGTACGCAGGATGCGTATTACGCGCCTCCTTTAGGTGTAAGGGACTATTCCCCTGTGTCGCAGGGCTATGGGTACCCTCATCAGGATAATAATAGTTATTACCATTCTGCGATTCAAACGACGTCGTATGCACAGCCTCAAACGGCGTCGTATGGACATGGGAGTGAGTACGCGCCGCGGGAAGAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTGGCTGTGGGCGCGGTGGCTGGGGTTCTAGGTGGAGTCGCGCTGGTGGAGGGTGTTGATTTTCTAGAGGAGAAGATTGCTGATGACGTGGCAGATAATGTTGAGGATGATCTTGGATATGATGAAGATGATTTCTAG 771 0.546 MASHYELQVKLESARGLKNVNWRHGANRPYAVVWVDAKNKCSTSVDEDGDTEATWDQTLVFPLPPEPLENLTLHVDVVHAGSEEDIEPIIGSARLKLVEVLEEVGVGARVPRTLSLKRPSGRPQGNVDVNVVIRASGGYRTQDAYYAPPLGVRDYSPVSQGYGYPHQDNNSYYHSAIQTTSYAQPQTASYGHGSEYAPREEKSKFGGMGTGLAVGAVAGVLGGVALVEGVDFLEEKIADDVADNVEDDLGYDEDDF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02115 256 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Viun4g02115 256 Pfam C2 domain 6 100 IPR000008 -
Viun4g02115 256 PANTHER INGRESSION PROTEIN FIC1 7 216 - -
Viun4g02115 256 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Viun4g02115 256 Gene3D C2 domain 1 134 IPR035892 -
Viun4g02115 256 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 132 IPR035892 -
Viun4g02115 256 SMART C2_3c 6 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02115 Viun-Chr4 36681914 36682979 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02115 - - gmx:100805876 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02115 4 36681914 36682979 Viun4g02115 4 36681914 36682979 ECH