Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02114 ATGGAGACACCATTAGTACCCGAAAAGTTCAGTGCAGAAGCTGATTACTTGGCAGTGAAAGGGTTGAAGGATGTTAAATTTGTCTTTTGGACAGAGACAGTGAAGATATGGAGAATAGCATTTCCAATGGCACTGTCTGCAATCTTTCAGTTTTTGACAGTGCTCTCAAATTCAGTCTATGCTGGTCATCTTGGAGACCTTCAACTCTCTTCTCTCTCTGTTTACCATGGTGTTCTTGGTTCCATCTATGTTTACTTGTTGTTGGGTATGTCTTCTGCATTAACAACACTGTGTGGCCAAGCTTTTGGAGCTGGGCAAATTCAATCTACTTGCATATATGTTCAAAGATCATGGATTGTACTTAGTTCCACTTGCATAATCCTCTTACCCATTTATGTGTATTCTACACCAATCTTAAGGTTGCTTGGCCAAGAAAAAGAAATTGCAGAACTTGCTGGAAGGTATTCTGTACAAGTAATTCCCTACATGTTTTCCTGTTCCATAACTTTTCCCTTGCAAGCTTTTCTTCAGTCTCAGAGCAAAGTTAAAGTTATTATGTGCTTTGAATTTGTGGGTTTGCTCTTGCAAAATGTGCTGCTGTACATCTTCATAACTGTGTTTGGTGGGGGAACAACAGAGATAGCCATTGTCACTGATGTTGTTGCATGGGTTTATGCTTTGGCTTTGTTTGTGTATACCATTTTTTGGTGCAAAGAATGGAGTGAATTTTCTTGGATGGCGTTCAGGGATTTGTGGGCATTTGCTAAGTTTAGTTTTGCAGCTTCTGTGATGAGTTGCTTGGAGCAATGGTATGGTACATGCATTGTTCTTCTTGCTGGGCAACTGGACAATCCTGTGATTGCTGTTGGTTCCTACTCAATTTGCTTCAATGTTCTGGGTTTGCACTTAATGCTGGTCCTTGCAATAAGGGCTGCCACAAGCATTCGGGTCTCTAACACACTAGGAATGTCTCATCCAAGAGCAGCCAAATACTCTTTCTGTGTGGCAATATTGCAGTCTCTCCTCCTTGGAATTTTGTTCATGACTGTTACTTTCTTGAGTAAAGAAGAGTTTGCCAAAATCTTTACCAACAGTGAGGAAATGATAGGAGCTGCTGCAGATTTAGCATACCTTCTTGGTGTATCAATGCTTCTCAATAGTGTTTCACAAGTGATGTTAGGTGTGGCCGTTGGGAGTGGATGGCAAGTTATGATTGGTTACATAAACCTAGCATGCTATTACATTGTAGGACTACCCATTGGATTTTTCCTCGGATTAAATCAACATTTTGGTGTCAAGGGTCTTTGGGGAGGCACAATGTGTGGCAGAGTTCTTCAGATATTAGTCCTCTTTGTGATTATTTGGAAGACCAACTGGTCTAAGGAGGTGGAGCAAACAGCTCATCGCATGAGAATATGGAGAATCAACAACCTCCACTCAGATGACATGAGAAATGTTACATGA 1464 0.4098 METPLVPEKFSAEADYLAVKGLKDVKFVFWTETVKIWRIAFPMALSAIFQFLTVLSNSVYAGHLGDLQLSSLSVYHGVLGSIYVYLLLGMSSALTTLCGQAFGAGQIQSTCIYVQRSWIVLSSTCIILLPIYVYSTPILRLLGQEKEIAELAGRYSVQVIPYMFSCSITFPLQAFLQSQSKVKVIMCFEFVGLLLQNVLLYIFITVFGGGTTEIAIVTDVVAWVYALALFVYTIFWCKEWSEFSWMAFRDLWAFAKFSFAASVMSCLEQWYGTCIVLLAGQLDNPVIAVGSYSICFNVLGLHLMLVLAIRAATSIRVSNTLGMSHPRAAKYSFCVAILQSLLLGILFMTVTFLSKEEFAKIFTNSEEMIGAAADLAYLLGVSMLLNSVSQVMLGVAVGSGWQVMIGYINLACYYIVGLPIGFFLGLNQHFGVKGLWGGTMCGRVLQILVLFVIIWKTNWSKEVEQTAHRMRIWRINNLHSDDMRNVT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02114 487 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Viun4g02114 487 Pfam MatE 261 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun4g02114 487 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun4g02114 487 NCBIfam MATE family efflux transporter 42 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun4g02114 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02114 Viun-Chr4 36653411 36656853 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02114 K03327 - gmx:100813527 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02114 4 36653411 36656853 Viun4g02114 4 36653411 36656853 ECH