Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02041 ATGAGTTCATATTTTGAGGAAAAGGCACCTTGTTGTGGATCTCACTTTTGGATTTTACTCAGCACTTGTTGGGGTTTTGTGTTATTTGCTGCTATCACATCTGGTCTTGCTCTAGGACTCTTATCCTTCAGCCAAGTTGATCTTGAGGTTCTTGTTAAAGCTGGGAAGCCTCAAATTCAGAGAAATGCAGCGAAGATTATGTCAGTTGTTAAGAATGAGAATTTACTTTTATGCACCCTCCTTGTAGCAAAATCAATGGCACTAGAGGGGGTTTCTGTTTTTATGGAGAAAATGTTCCCAGAGTGGATTTCAGTATTACTATCAGCCACCATGTTGGCTATCATTGCAGAGATTATCCCTCAAGCCTTGTGTTCTCGATATGGTTTAAGTGTTGGAGCAGCATTGTCTCCCTTTGTTCGAGCTCTTATGCTGATTTTCTTCCCAATTGCATATCCACTTAGTAAGTTGTTGGATTGGCTTCTTGGCAAGGGACATACTGCACTTTTAGGACGAACAGAGTTGAAGACTTTAGTCCATTTACATGCAAATGAGGCAGGTAAAGGTGGAGAATTGACACTTCATGAAACTAAAATAATTGCTGGAGCTTTGGACTTAACACAGAAGACTGCTAAAGATGCTATGACACCTTTAAGTGAAACATTTTCTCTTGACATAAACTCCAAACTTGACATGCATACAATGGGCTTAATAATGAGCAAAGGTCACAGCCGAATACCAGTCTACTCTGGAAAACAAACAAATGTTGTTGGTATCATCTTGGTTAGGAATTTAATCTTCTGTCGTCCGGAAGATGAAACACCAATTAAATATATGACTATCAGGAGAGTTCCTAGAGTTGCTGAAGATTGGCCATTGTATGATATTCTGAATCAGTTCAGGAATGGTCAAAGCCACATGGCTGTTGTCCTCAAGTGTGAAGAAAATATCAGAACTGCTGCAACTGAGAGAGAAGGAAAAACTCCAGGACTTGGATCTTCATGTGAACCGGGAGATTATAGTCGCATCTCAACTGATGCATCAGATTGGCATTCACAAGAAACAGAATATTACAGTGCAACACTGAAGAGTGTCATGAATCGTGAGGGTGACTCAGGTCTTCCACAGAGAATATCAGAAGAACCTGATGCAAGTTCATCCTTTGAGAATGTTGAGTCTTTTCCAACAACAGATGAAGAAGTGATTGGGATAATCACATTGGAAGATGTTATGGAAGAGTTACTTCAGGAAGATATATTGGATGAAACTGATCATTATGTTGATGTTCATCAAAATATCAAGATCAAACTGCAACATGCAAGAAGAGTGTCATCTGGGTCATCAAGAAGGGCTTCAAGTTCTCGTCAACAACGGAGAAGTTCAGATGCATCTCGAGTTTACTTTTTAAGCCCTACATATGTTTTACCTGTTTCTCCATAA 1437 0.396 MSSYFEEKAPCCGSHFWILLSTCWGFVLFAAITSGLALGLLSFSQVDLEVLVKAGKPQIQRNAAKIMSVVKNENLLLCTLLVAKSMALEGVSVFMEKMFPEWISVLLSATMLAIIAEIIPQALCSRYGLSVGAALSPFVRALMLIFFPIAYPLSKLLDWLLGKGHTALLGRTELKTLVHLHANEAGKGGELTLHETKIIAGALDLTQKTAKDAMTPLSETFSLDINSKLDMHTMGLIMSKGHSRIPVYSGKQTNVVGIILVRNLIFCRPEDETPIKYMTIRRVPRVAEDWPLYDILNQFRNGQSHMAVVLKCEENIRTAATEREGKTPGLGSSCEPGDYSRISTDASDWHSQETEYYSATLKSVMNREGDSGLPQRISEEPDASSSFENVESFPTTDEEVIGIITLEDVMEELLQEDILDETDHYVDVHQNIKIKLQHARRVSSGSSRRASSSRQQRRSSDASRVYFLSPTYVLPVSP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02041 478 PANTHER METAL TRANSPORTER CNNM 6 458 IPR045095 GO:0010960
Viun4g02041 478 MobiDBLite consensus disorder prediction 367 392 - -
Viun4g02041 478 FunFam DUF21 domain-containing protein 193 328 - -
Viun4g02041 478 SUPERFAMILY CBS-domain pair 198 415 IPR046342 -
Viun4g02041 478 Gene3D - 373 421 IPR046342 -
Viun4g02041 478 MobiDBLite consensus disorder prediction 440 462 - -
Viun4g02041 478 Gene3D - 195 330 IPR046342 -
Viun4g02041 478 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Viun4g02041 478 MobiDBLite consensus disorder prediction 439 462 - -
Viun4g02041 478 MobiDBLite consensus disorder prediction 378 392 - -
Viun4g02041 478 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
Viun4g02041 478 Pfam Cyclin M transmembrane N-terminal domain 27 184 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02041 Viun-Chr4 36168767 36172074 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02041 K16302 - gmx:100798424 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02041 4 36168767 36172074 Viun4g02041 4 36168767 36172074 ECH