Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01839 ATGCGTACTACGGCGGAATTTCAAGGTTCTGTACTGAATCTTCGTGGGGTTCAGGTTCACTCCATGGAGGGTTCAAGCATGGAGCAAGAGCTTGATTTGTTTCAGAAGCATGTGACTGAGCGGTTCCTGGAGCTATCTTCAGTTGAAAGCGGGGAATTGCTCTCTCTTTCATGGGTTAGGAAGCTACTGGATTCATTGCTGTCTTGCCAAGAGGAGTTCAGGGTGATTCTTCACAACCACAGGGCCCAGGTGTCGAACCACCCTCCCCTGGATCGCATGGTGGGTGAGTTTTTTGAAAGGAGTGTGAAGGCCCTTGATGTGTGCAACGCAATCCGTGATGGGGTTGAGCAGATTAGGCAGTGGCAGAAGCTGTTGGAGATTGTTATCTGTGCATTGGATCAGAAGAGGAGCATTGGTGAGGGCCAATTTCGCCGCGCAAAGAAGGCTCTTGTTGACTTGGCCATTGGAATGCTTGATGATAAGGAATCCAACTCTAGTGGTTCCATTGCTCATAGGAACAGGTCCTTTGGTAGAAACAACCATGGTTCAAGAGATCACCACCATAGCAATAATCAGCACAATTCCTTTGGGCATTTCAGGTCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTCCAAGCCATTGGGAACAACTTGTCCCCTCCTAAGGCCAATGATATTGTTGCCACCAATGGCCTTGCATTGCCTATTTACACAATGAGTTGTATTCTGGTGTTTGTTATGTGGGCACTTGTGGCTGCAATTCCCTGCCAGGATCGTGGTCTAGGGCTCCATTTCTCTGTGCCGAGGCAGTTCCTGTGGGCGGCTCCGGTGGTGGCGCTGCACGAGCGGATCGTGGAGGAGTCAAAGAAGAGGGAGAGAAAGAACACATGTGGGTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTGCAAGAGTGATCAATGAGTTGGCTGATTCTTTGCAGTTTCCTTTGAGTGAGAAGAAGGGAGAAGAGGTTAGGCAGAGTGTGCAAGATGTTTCAAGGGTTTGTGAAGCCTTGAAAGATGGATTGGACCCTATGGAACGACAAGTGAGGGAAGTGTTTCACAGAATTGTGCGCAGCAGAACTGAAGGGCTTGACACCCATGGCAGAGGGTAA 1152 0.4931 MRTTAEFQGSVLNLRGVQVHSMEGSSMEQELDLFQKHVTERFLELSSVESGELLSLSWVRKLLDSLLSCQEEFRVILHNHRAQVSNHPPLDRMVGEFFERSVKALDVCNAIRDGVEQIRQWQKLLEIVICALDQKRSIGEGQFRRAKKALVDLAIGMLDDKESNSSGSIAHRNRSFGRNNHGSRDHHHSNNQHNSFGHFRSLSWSVSRNWSAARQLQAIGNNLSPPKANDIVATNGLALPIYTMSCILVFVMWALVAAIPCQDRGLGLHFSVPRQFLWAAPVVALHERIVEESKKRERKNTCGLLKEIHQIEKCARVINELADSLQFPLSEKKGEEVRQSVQDVSRVCEALKDGLDPMERQVREVFHRIVRSRTEGLDTHGRG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01839 383 Pfam Protein ROH1-like 7 379 IPR008511 -
Viun4g01839 383 MobiDBLite consensus disorder prediction 178 192 - -
Viun4g01839 383 MobiDBLite consensus disorder prediction 162 192 - -
Viun4g01839 383 MobiDBLite consensus disorder prediction 162 176 - -
Viun4g01839 383 PANTHER BPS1-LIKE PROTEIN 13 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01839 Viun-Chr4 32716294 32718380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01839 - - gmx:100806977 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01839 4 32716294 32718380 Viun4g01839 4 32716294 32718380 ECH
Viun4g01839 4 32716294 32718380 Viun7g03126 7 33847645 33849832 PCT