Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01838 ATGGACCTGGAACTGGGACTCAAAATCACCAAAACTAGAGATGACATTGCTTCCATCTCTAAATATCGATTAGCAAAAGCAGGACCTGTTTTTCAATCTAGAGAAACAAACACCGCTTTCATCCTCACAGCTCATCTCAAAGGTTATAAGAAGAATAACATTAACATCAAGATTAGTGAAGATGGTAGTAAGATATCAGTTAGTGGAGAGAAGCCTGTTCAGAATATTTTGATGATGGGATGGTTAATGCATAAGAAAGAGGTTGATGTTGCAGGGTTTAATAAGGTTTTCAGAATTCCTGATGGGGTGAAATTGGATGGGATCAAAGCCAAGTATGATGAGGAGGAATGGATAATGAACATTATCATGCCAAAATTGGTTAAAGGAATTTGTGGGGTTAAGATTGAAGAGATCAAGGAAGAAGAATCTGATGGAAGAAGATCTGAACAAGAGAAAAATGAAGGTGATCTGAACATTCCTAGTGCTGTTGGAGAGACAAGCCAAAAGGGGGCTAAAGAGTCTGAAGTTCAGGCAATGGAGGACAGTGAAAGATTCATGGAGAAGAAAGCAGAAGTGTCTAACAATATGCTTGATGATTCCAACAGGGAAAAAACTAAGGATACTGTGCATAGAGAAGTAGAAGAATCTAAAGTTGGAAATGATGGTGGAAATGGAGATAGTTTCAGAGAGGTTGGAAAGGAAGGGTGTGAAGTGAAGAACACATCAGAACAAGAGAAAAAAGTTGGAGTAGGCACCTCACAGAAAATTGGAGAAGAGGGCCAAAAGGAAATCAAAGAATTAAAGTTGAAGAATGAGGATGGAAGGGTAAAAACATCAGCAAAGGGGGAAAGTGTAGGTGAAGGTATGCCTAAAAACATTGGAGGAGATACAAGACAAGATCAAGAGTTGAAGGTTCAAGAAATGGAGGACAATGGAGGTTTTTTAGAGAAGGAGGAGAAAGGAGTGAGTGAAAATATGCTTGATGATACCAATGCAAACATAATTGGAGATGTGATTCAGAAAGAAGAAGAATCCAAGTCAGGAATTAAGGATAGAGATGGAGAAAGTGTGAAAGAAAAGAATGTGAGAGCAGGACACAAAGGAATGAAGATATCAGAAACTGAGCAGAATGTTGGTGCACATGTCATACAGAATGTTGGAGATACAATCCAAGGAGTATCTAAAGATTCTGTTATAGAACAAATTGGGGAAAATAAAAGTATTGTGGAGAAGATGGAGAGAGAAGAGCCAGAAGAGATGCTTGTTGAAGCCAATGTGCCTACTGAGAGAGAGACACTTGGAGACTCAAACCAAAAACAATTTAGAGAGCCTAGGCCCGAAACTGAGGATAGACTAAAAGAAAGTGTGAAGGAAAATAGAATGGAAACAATGAAGGCACCAGAACTTGACCAAAATGTAGATGATCACGTACCTTCTAACATTGGTGGTATAAGCCAAGAAGAACATAAGGAGTCTAGGATTCAATGGGAGAAGAAAACTAAAAGAATAAAAGAGAATATGGATGAATGGAAATCTGAAAAAATACCTATTCAGGCAAGTGAGGATGGTAAAAAGCACATCTATGGCAAGAGCATGCAAGAGAACATTAAAAAGCCTAAGATTGAAACTGGGAATGAAGATCACATTGAAACTGGGAATGGAGATCAAGAATATGGAGTAAAGGCTGGTAAGGAAGAATTTGATTCAATGGAAACAAGAAGGGAAACATTTCCTCAGAAGTTGCCAAAAGGCACAATTGAGGAAGGCAAAAGGTTGAGTGTTTCAAAAATGCAAGAAACTGAAGATGTCATAGAAGCAAAGATCAAAACAAAATGGAAAGAGAATGAATATTTGGTGGTTAAGGATGAAGGTGAAGAACACAGAAGGATGCACAAGCAAGCCAAAAAAGACTTGGCAAAAGAGACACTGCGAGAAAATGAAGATGTCAAAGAAGCAATGGACAAAAGAGAAAGGAAAGAGATCGAATATTTTGTGAATAAAAGTGCAGGTGAAGAGCATAAAAGGAGGCATATGGAGGCAAAAAAAGACTTAGCAAAAGAGACAATGAAAAAAAATGAAGCAGCAATGGACAAAAGAGAAGACAAAGAGATTGAGTACTTTCTGGAAGCAAGGAAGGACTTAACAACAAAGAAAATTCAAGAAACTGAAGATATCAAAGAAAAAATGTCCAAAACAAAAGACAAAGGGATTGAAAAATTTGAAGATACGGGTGAAAGGAAAGAACACAACAGGTTGTATATGAAAGCGAAGGACTTCAAAAAAGAGACAATACAGGAAAATGAAGATATCCAAGAAGCAATGATAAAAAGAGAAGGCAAAAATAATGAACATTTTGGGGATAAGCGTGGTGAAAACCCCCAAAGGATGCATATGGAAGCAAAGAAGAACATAGGAAAGGAGATAATGCAAGAAACAGATGGTGGCAAAGAAGCAACCGTTAAAAGAAAAAGAGAAGAGATTGGAAATTTTACTGATAAGGTTGAAAGTGAAGAACCAACAAAGATGCTTACGCATGCAAAGAAAGAGTTAACAAAAGAAACAGAGCAAGAAAACGAAAAAGTAAAAGAAGCTATGCTCAAAACGAAAGACAAAGAAACTGAACATATTGTGGATAAGGGTGAACCCAAAAGCATGAATGTGGAACCAAAGAAGGATTTAACAACAAAGATCGTGCAAGAAAGTGAACATGTCAGAGAAGCAATGGTCAAAGGAGAAGGCAAGGGTTATAAATATTTTGTCGATAAAGATGTAAGTGAAGAACCCGAAAGGATGCATGTAGAACCAAAGAAGGACATGGCAAAGGAGAAATTGCAAGAAATAGAAAGTTCCAAAGAAGCAACGGTCAAAATGAAAGGCAAAGAGATTGAAAATTTTGTTGTTAAGGATGGAGGCGAAGAAAACAAGATGAACATGAAACTAAAGAAAGAGTCAACAAAAGAAACAAAGCAAGGAAGTGAAAATGTCAAAGAAGCCATGGGGAAAATGAAAGGCAAAGAGACTAAATATTTTGTAGACAAGGGTGAAGGTGAAGAACCCAAAAGCATGCATGTGGAAGCAAAGAAGGAAGATGATAGAGAAGGCAAAGATCATGAATGTTTTGTGGATAAGGGTGAAGGTGAAGAGACCAAAAGGATGCTAATGGAACGAAAGAACGTAGAAAAAGAGACAATGCAAGAAATAGAAGGAGTCAAGGAAGCAATGGTCAAAAGAAAAGGCAAAGAGATTGAAAATTTGGCTGATAAGGATGAAGCTGGGGAACTCACAAAGATGCTTGTGAAGAAGTCAAACAAAGAGTTGACAAAAGAAAAAAAGCAACAAAGTGAAAAAATCAAAGAAGCTATGGTCAAAAGGAAAGGCAAAGAGACTGAATATTTTGCAGATAAGGGTGAAGATAAAGAACCCAAAAGCATGTATGTGGAAGAAAAGGACTTAACAACAAAGACTACACAAGAAAGCGAAGAACCCAAAAGGATGCATATCAAACCAAAGGACATAACAAAAGATACAGTACCAAAAACAGGAGTTAAAGAGGCAATGGTCAAAACAAAAGACAAAGAGATTGAAAATTTTGTTGAGAAGTTTGATGGTGAAGAGCGCATAAAGATGCTCGTGAAAGAGTTACCAAAAGAAAGAAACAAAAGAGAAAAATTCAAAGAAGTTATGGTCCAAAAGAAAGTCAAAGAAACTGAATATTGTATGGATAAGGATGAAGAAGAACCCATAAACATGCATGTGGAAGCAGAGAAGGACTTAACATCAAAGACTGTACTAGAAAGGGAAGATGTGAGAAAAGAAGTGGTCGAAACAGAAGGAAAAGGTTATGAATATTTTGTTGATGAGGGTGAGAGTAAAGAACATAAAATGACGAATATGGAAGCAAAGAAGAACATGGGAAAAGAGTCAATGCAAGAAAGAAAAGGTGCAAAAGAAGCAATGGCTAAAAGAAAAGGCAAAGAGATTGGAAGATTTGAAAAAGGTGAAGATAAAGAGACTAAAAAGGTGCATATGGAAGCGAAGAAGGACTTAACAACAGTGACAATGCAGGAAAGTGATGGTACCGATGAAGGCAATGAAAACAAATGCCTTTCTGATGAGGGCGAAGGTGAAGAACCCAACAGGATGTATATGGGAACAAAGAGAGATTTGACAAAAGAGGAAATGCATGAAAATGACGATGCCAAAGAAACTGTGATCAAAAGGAAGGGCAAAGAGATTGAGTATTTAGTGGGTAACAGTGGAGGTGAAGTTGAAGAACCCAAAAGGATACATACTGCACAAAAGAAAGAGCTAGCAACAAAGACAATGCATGAAATTGAAGATGCCAATGAAATCATGGTCAAAAGAAAACACAAGGAGATTGAAAATTTTGAGGATAATGCTAAAGGTAAAGAATCCAAAATTAGGGAAGCAAAGAAAGACTCAACAAAAGTGACAATGAAAGAAAGTGATTATACCAGAGAAGCAATGGTTAAAAGAAAAGGTAAAGAGGTTGAAAATTTTGTAGATAAAGGAGAAGAACCGCAAAGGATGCATACGGAAGCAAAGAAGGAGTTAACAACCAAGAGAAGAGAAGAAAGTGAATTTGTGAGAGAAGCAATGGTCAAAAGAGAAGGGGAAGAAGAGATGGACTATTTTCTGAAAGAGGGTGAAGATGAGAAGGACATACCAAAGGAGAAAATTCAGATAGTTGAGAAGATTGAGCATGGAATTATGGATAAGGATCAACAAAATGTACTAGGAAAAACTACTAAAAGAAAAGCTGAAGTACCAACTGAAGAGGGTCCCAAGCTGGTGGGGGGACAAGATGGAAGCAGAGGACTTGAGGTTTCAAACATGGAAGACACAAAAGAAATTATCAAAGAAGAAATGGCTGAAACAGAAAGTTCAAGGGAAAAGGTTCAAGAACAAAAGTCTAAGAAGAAAGAAGAAACTAGTAGAGTTATTCAGAAAACAACAGCAACTGAGATCTTACAGAAGGAAACTGAGGAGTCTAACAATGAAAGAAATACCACAGAAAGACCAAATTTACCAAACAATATGGTGAAAGTGGTATTTGAAGTGTTGGGGACTTTTCAGGCAAAGCTTCCCAAGAAAGTGATGGAAGCAATTGGCCAAAATAAGGAGAAGAATGAATATGTTATTGTGAAACTGAAAGCAGAGGGATCTATAGAGATGCATGTTGAACCAAATGAGGCTTTTGATGAGGATGAAACTGAGGAAAGAAGTGAGAAAGAAGTTAGAAAGCCAAAACTCAAGTCTACTGAGCAAATAAGTGGCAGAGAGAATGTTGATTTTGGGGTGTTTGATGGAAGCAAAAGATCAAAATTTCTTGAGATGGGAGAAACACAAGGCGCAAAAGAAGACAATACACAAATGGAGGAGACAGTGAAGAAAATAAATGAAGAGCAATCTGAGAAGATAGAAGTTGAAGAAAAAGGAAGAAAGTCATCTCAGAAAGGAAGAGAAGGTCCTAAGATCCAAACGATGGTACAAAATCAACATCGTTTGCAGGAAGAGAAGGAAATGCCCTTGGGAAAAACAACAGAAGGAGAACTTGCACAAGCCATAACTACACATTCAAAAGCAAAAAGTGAGATTGATGAGCTACATGTAAATCAACTACCATCTCCATCTATTGAAATGAGGAATATAGAGCCACGTGAATCAAAAAAGGATGGTTTAAAAGAATTCATTCATTCTATAGATAGTACTGCAGCATCAGAAGTAGTTGCAGATGAAGCGGCTGAACCATCAAAATTTCTGAGTTCATCTTCCACTCAACCATTTGAAGTTGAAGGAAAGGATAAGATAGGTGCTAGTTATGATTATGAATCTCAAGATTCAGAGATGGACTCTGAAATAGATGGCGAAGCATCAACCAAAGGTGAAACAGACGAAGAAGTTCTACAAAGAGAGACACCGCAGCCAGAGTTCCCTGAAGATCAACAATGCACACACAAAGCTCTGGAAGAAACACATGAAATTGAAGAAGAAAAGGAAGATGAACAAGTAGATGAATCCGATCAGGAAGACTCTGAAGAGTTGGAGGAGCAAAAAGAATGTGAGGAGGAAGCCATTGGAGGGAAGAAGGACCAGAAAAGGTCAAAGAAAATGATTGTTTCCACCATCATAGCAGGATCAGCCCTTCTTGCTTCAGGAATTTTTCTCATTATTCGACATAGAAGATCCACAAAAGGTGCCAAGTGA 6228 0.3757 MDLELGLKITKTRDDIASISKYRLAKAGPVFQSRETNTAFILTAHLKGYKKNNINIKISEDGSKISVSGEKPVQNILMMGWLMHKKEVDVAGFNKVFRIPDGVKLDGIKAKYDEEEWIMNIIMPKLVKGICGVKIEEIKEEESDGRRSEQEKNEGDLNIPSAVGETSQKGAKESEVQAMEDSERFMEKKAEVSNNMLDDSNREKTKDTVHREVEESKVGNDGGNGDSFREVGKEGCEVKNTSEQEKKVGVGTSQKIGEEGQKEIKELKLKNEDGRVKTSAKGESVGEGMPKNIGGDTRQDQELKVQEMEDNGGFLEKEEKGVSENMLDDTNANIIGDVIQKEEESKSGIKDRDGESVKEKNVRAGHKGMKISETEQNVGAHVIQNVGDTIQGVSKDSVIEQIGENKSIVEKMEREEPEEMLVEANVPTERETLGDSNQKQFREPRPETEDRLKESVKENRMETMKAPELDQNVDDHVPSNIGGISQEEHKESRIQWEKKTKRIKENMDEWKSEKIPIQASEDGKKHIYGKSMQENIKKPKIETGNEDHIETGNGDQEYGVKAGKEEFDSMETRRETFPQKLPKGTIEEGKRLSVSKMQETEDVIEAKIKTKWKENEYLVVKDEGEEHRRMHKQAKKDLAKETLRENEDVKEAMDKRERKEIEYFVNKSAGEEHKRRHMEAKKDLAKETMKKNEAAMDKREDKEIEYFLEARKDLTTKKIQETEDIKEKMSKTKDKGIEKFEDTGERKEHNRLYMKAKDFKKETIQENEDIQEAMIKREGKNNEHFGDKRGENPQRMHMEAKKNIGKEIMQETDGGKEATVKRKREEIGNFTDKVESEEPTKMLTHAKKELTKETEQENEKVKEAMLKTKDKETEHIVDKGEPKSMNVEPKKDLTTKIVQESEHVREAMVKGEGKGYKYFVDKDVSEEPERMHVEPKKDMAKEKLQEIESSKEATVKMKGKEIENFVVKDGGEENKMNMKLKKESTKETKQGSENVKEAMGKMKGKETKYFVDKGEGEEPKSMHVEAKKEDDREGKDHECFVDKGEGEETKRMLMERKNVEKETMQEIEGVKEAMVKRKGKEIENLADKDEAGELTKMLVKKSNKELTKEKKQQSEKIKEAMVKRKGKETEYFADKGEDKEPKSMYVEEKDLTTKTTQESEEPKRMHIKPKDITKDTVPKTGVKEAMVKTKDKEIENFVEKFDGEERIKMLVKELPKERNKREKFKEVMVQKKVKETEYCMDKDEEEPINMHVEAEKDLTSKTVLEREDVRKEVVETEGKGYEYFVDEGESKEHKMTNMEAKKNMGKESMQERKGAKEAMAKRKGKEIGRFEKGEDKETKKVHMEAKKDLTTVTMQESDGTDEGNENKCLSDEGEGEEPNRMYMGTKRDLTKEEMHENDDAKETVIKRKGKEIEYLVGNSGGEVEEPKRIHTAQKKELATKTMHEIEDANEIMVKRKHKEIENFEDNAKGKESKIREAKKDSTKVTMKESDYTREAMVKRKGKEVENFVDKGEEPQRMHTEAKKELTTKRREESEFVREAMVKREGEEEMDYFLKEGEDEKDIPKEKIQIVEKIEHGIMDKDQQNVLGKTTKRKAEVPTEEGPKLVGGQDGSRGLEVSNMEDTKEIIKEEMAETESSREKVQEQKSKKKEETSRVIQKTTATEILQKETEESNNERNTTERPNLPNNMVKVVFEVLGTFQAKLPKKVMEAIGQNKEKNEYVIVKLKAEGSIEMHVEPNEAFDEDETEERSEKEVRKPKLKSTEQISGRENVDFGVFDGSKRSKFLEMGETQGAKEDNTQMEETVKKINEEQSEKIEVEEKGRKSSQKGREGPKIQTMVQNQHRLQEEKEMPLGKTTEGELAQAITTHSKAKSEIDELHVNQLPSPSIEMRNIEPRESKKDGLKEFIHSIDSTAASEVVADEAAEPSKFLSSSSTQPFEVEGKDKIGASYDYESQDSEMDSEIDGEASTKGETDEEVLQRETPQPEFPEDQQCTHKALEETHEIEEEKEDEQVDESDQEDSEELEEQKECEEEAIGGKKDQKRSKKMIVSTIIAGSALLASGIFLIIRHRRSTKGAK 2075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1502 1541 - -
Viun4g01838 2075 Coils Coil 1616 1650 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1733 1773 - -
Viun4g01838 2075 Coils Coil 298 318 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1292 1404 - -
Viun4g01838 2075 Coils Coil 847 871 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 317 376 - -
Viun4g01838 2075 SUPERFAMILY HSP20-like chaperones 29 125 IPR008978 -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1292 1351 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 968 1065 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 258 280 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1131 1178 - -
Viun4g01838 2075 Coils Coil 493 513 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 140 181 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 514 594 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 668 697 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 2002 2028 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 409 496 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 198 300 - -
Viun4g01838 2075 Coils Coil 1789 1819 - -
Viun4g01838 2075 Coils Coil 2019 2039 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1616 1655 - -
Viun4g01838 2075 Gene3D - 26 129 IPR008978 -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1916 2042 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1463 1488 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 625 654 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1131 1179 - -
Viun4g01838 2075 Coils Coil 1103 1123 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 339 370 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1747 1764 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 774 892 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 198 219 - -
Viun4g01838 2075 CDD ACD_sHsps-like 34 125 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 227 244 - -
Viun4g01838 2075 Coils Coil 685 705 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1786 1902 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1961 1981 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1786 1828 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1360 1404 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1580 1684 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 140 154 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 435 472 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 409 425 - -
Viun4g01838 2075 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 21 141 IPR002068 -
Viun4g01838 2075 Coils Coil 1453 1480 - -
Viun4g01838 2075 Coils Coil 639 659 - -
Viun4g01838 2075 MobiDBLite consensus disorder prediction 1580 1599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01838 Viun-Chr4 32700652 32708217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01838 - - vra:106760392 2822.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01838 4 32700652 32708217 Viun4g01838 4 32700652 32708217 ECH
Viun4g01838 4 32700652 32708217 Viun7g03125 7 33841919 33843008 PCT