Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01797 ATGTCTCTGGCATCTTCAATCCCATGCATCAAAATCCCACCTTGTTCCTCTTCTCCATCATGCTCTTCCTCAACTTCATCCTATTCTTTCAGGTTTTCTTCTTCCAAGCCTCACAGTGTCACTATAAGGAGCTCTCAGGCTGAAGGGCCTGTGAGAAGGCCAGTGGCACCCCAGATAAAAGAACCATCATCAGCAACTGTTCCTCCTCAGCTTCAGAAGCCAACACTTCCTTCTCAGACTCCTCCATCACCTCCACCACAGAAGCCTGCTACTGCTCTTGCTGGGGATGCTAAGAATCTCATTACATTAGAGTTTCAAAGGCAAAAGGCTAAGGAGTTGCAGGAATACTTCAAACAGAAGAAGCTTGAAGAAGCAAATCAGGGTCCTTTCTTTGGTTTCATAGGGAAAAATGAGATTAACAATGGAAGATGGGCAATGTTTGGTTTTGCTGTAGGGTTGCTTACAGAGTATGCAACAGGCTCAGACTTTGTTGATCAAATAAAGATCCTTCTCTCGAATTTTGGAATAGTAGATTTGGAATGA 543 0.4383 MSLASSIPCIKIPPCSSSPSCSSSTSSYSFRFSSSKPHSVTIRSSQAEGPVRRPVAPQIKEPSSATVPPQLQKPTLPSQTPPSPPPQKPATALAGDAKNLITLEFQRQKAKELQEYFKQKKLEEANQGPFFGFIGKNEINNGRWAMFGFAVGLLTEYATGSDFVDQIKILLSNFGIVDLE 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01797 180 Coils Coil 103 123 - -
Viun4g01797 180 Gene3D Chlorophyll a/b binding protein domain 62 175 - -
Viun4g01797 180 MobiDBLite consensus disorder prediction 74 89 - -
Viun4g01797 180 SUPERFAMILY Chlorophyll a-b binding protein 126 169 - -
Viun4g01797 180 MobiDBLite consensus disorder prediction 14 46 - -
Viun4g01797 180 PANTHER OS02G0610700 PROTEIN 16 173 - -
Viun4g01797 180 MobiDBLite consensus disorder prediction 14 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01797 Viun-Chr4 32116631 32118164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01797 - - gmx:100527001 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01797 4 32116631 32118164 Viun4g01797 4 32116631 32118164 ECH
Viun4g01797 4 32116631 32118164 Viun7g03077 7 33504968 33507822 PCT