Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01670 ATGGCCATGTTCGATTCCCTCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACTCTGCTGAAACTGACAATTCCCCGAATAAAGCTGTTAAGAAACAGAAGAGAGATTCAGTTAAAGAATATGCGGCGTGACATCGCCAAGCTACTTGAGACTGGCCAAGAAGCCACAGCTCGTATTAGGGTAGAGCATATTATCAGAGAGGAGAATATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGTGAACTTATTGCTGTCCGTCTTCCAATAATTGAATCTCAAAGGGAATGTCCCCTTGACTTGAAGGAAGCCATATCTAGTGTATGTTTTGCTGCACCAAGGTGTGCAGATCTGTCAGAGTTGCTGCAGGTTCAGATGCTATTTGCTGGCAAATATGGGAAGGAATTTGTATCTGCTGCAACTGAGCTCAGGCCAGACTGTGGGGTTAATCGCCAGTTAATAGAGCTACTTTCAATTCGTGCTCCTACACCAGAAAAGAAACTGAACCTTCTGAAAGAAATTGCTGTTGAGCACAATGTAGAATGGGACCCAGCAGAATCAGAAACTGAGTTCTTTAAAAAACATGAAGATTTATTGAATGGCCCCACCCAATTCTTTAGTGGGTCTAAGTTGCCCCTTCCTGATGAAAAGCCCCACGAAGAGATGTACTCTGCTCATGAAACACCCAATAAAGAAGAACCTGATTCTGATTCTGGCTCTGATACATTAGAATTTCCTGAAGTTCCTAAAGTATCAGTCCGGCCTAACGCAAATGTTGCCACAGCTCCAGAAATGGTTACACATCTAACTATGGAACCCCTTGATGTTGATCTTGATTCATCAAGCAATTCCGGAGATTTTGAAGATGTCAAGCAGGAGCAAGTTGAAGATAGATCAACAGTTCACAAAGATGAACCCCATACTTCAATTACCAAAGAGAATATACAGTTCGTGCCATTCATCTCTCCTCCAGCATTATTATCATCTGGATCATTTTCTGCAAGACCTAGTGAATCATCTCCCACCCTGTCAAGCGCAAAACCGGAACCCAATGTGGACTTACAGGATGTGTTGGCTGCAGCCCATGCTGCTGCAGAAACTGCTGAACGTGCTGCGGCTGCAGCTCGCACAGCAGCTAGTCTTGCTCAAGTCCGAATTAATGAGCTGACTAGGAAGAGAAGTGATGAACGTGTACCGGACAGCAGCTCCGATAACCCATTTTATGCTGGTGGTGATAATGAATCTCCAACAAAAGAAAAGCATTTCACTGGGCAAAATCCTGCAGATAACTCTGATGTCCATAATAGAAAAGATCTTGAACATCACCAGGATCATTATACTTCCCCAGGCTCTCATTCATCAAGTTTTCCTTCCTTTGACACACTCAAGGAAGATTTTGATTCCTCCCTGCCCAGTAATCATGTACTGACTGACAACTCCTCTAGTCACCAACCCAAGAGATTACCTTCAATGGACGATGACTCATACTTCTCATACCCCAACTTATTTACCTCTCAAAACTCGAATGTTGGATCTCATACTCATTCAGATAATAGCCGTCCCCCTCATGATCTGTGA 1581 0.432 MAMFDSLFNKGFKAAKCKTLLKLTIPRIKLLRNRREIQLKNMRRDIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLSELLQVQMLFAGKYGKEFVSAATELRPDCGVNRQLIELLSIRAPTPEKKLNLLKEIAVEHNVEWDPAESETEFFKKHEDLLNGPTQFFSGSKLPLPDEKPHEEMYSAHETPNKEEPDSDSGSDTLEFPEVPKVSVRPNANVATAPEMVTHLTMEPLDVDLDSSSNSGDFEDVKQEQVEDRSTVHKDEPHTSITKENIQFVPFISPPALLSSGSFSARPSESSPTLSSAKPEPNVDLQDVLAAAHAAAETAERAAAAARTAASLAQVRINELTRKRSDERVPDSSSDNPFYAGGDNESPTKEKHFTGQNPADNSDVHNRKDLEHHQDHYTSPGSHSSSFPSFDTLKEDFDSSLPSNHVLTDNSSSHQPKRLPSMDDDSYFSYPNLFTSQNSNVGSHTHSDNSRPPHDL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01670 526 Coils Coil 32 59 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 329 356 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 285 311 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 432 448 - -
Viun4g01670 526 Gene3D - 5 192 IPR042277 -
Viun4g01670 526 MobiDBLite consensus disorder prediction 498 517 - -
Viun4g01670 526 PANTHER IST1 FAMILY MEMBER 14 507 IPR005061 GO:0015031
Viun4g01670 526 MobiDBLite consensus disorder prediction 276 317 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 214 239 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 329 350 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 388 526 - -
Viun4g01670 526 FunFam IST1-like protein isoform A 6 192 - -
Viun4g01670 526 MobiDBLite consensus disorder prediction 204 258 - -
Viun4g01670 526 Pfam Regulator of Vps4 activity in the MVB pathway 18 182 IPR005061 GO:0015031
Viun4g01670 526 MobiDBLite consensus disorder prediction 449 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01670 Viun-Chr4 30462513 30468179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01670 - - gmx:100805899 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01670 4 30462513 30468179 Viun4g01670 4 30462513 30468179 ECH