Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00633 ATGGAGTTCTTCCAAAAGGCGAAAGTGGTGCGTTTGAGAAGCTACCATGACAAGTACATGTTGGCCGATGAGAATCAAGAAAACGTGTTCCAAGACCGTAACGGTTGCTACAATAACGCTAAATGGGAAGTGGAGATGATAGAAAACTCAAATTTCATAAGATTGAAAAGTTGCTACGGAAAATACTTAACAGCTTCAAACATGCCATTTCTATTGAGAGGAACGGGAAAAAAAGTGTTGCAGAGTTTGCCTTCTAGGTTGAATTCTGCTATGGAATGGGAACCCATAAGAGAAGGGGTGCAAGTGAGGTTAAGAACACGTTACGGACAATACCTTCGTGGCAATGGAGGATTGCCACCTTGGAGGAACACCATCACCCATGATGTTCCTCATCGAACGGCAACGGCAAACTGGGTTCTGTGGGACGTTGACATAGTGGAACTTCGACCTAAGAATCAACCGAAACCTAGACCAAGGCCAACACCTATTACACCACCCATTTCTCGTTCCTTGAATCCAACGCCACTGTGTCTTTCACCTTCTTCTTCTTCTCCCTCGGACATGGATTCATTGGTAAAGATTGATCTCCGATCTCCCACAACACCCGAGCCTGAAGATTCACAAGAGTGTTTATCACCTGTGAAAGAAGGAAGAGTTATATTTTACAATGTGGGTAACGAAAATGGTGATGTTGATGATGCAAAGAAAGAGTCATATTTTATCTTTAAAGGAAGTTGTGTGAATGAACTAAAAGATAAATTGAAAGAAGAAACAGGACTTGATGATGTTCTTGTGTGTTGTCGCAATCCAGTCACAGCAAAACTTTATCCACTTCGTTTACAATTACCTCCTAATACTTGTGACATGCATGTAGTTCTTGTTCCTTCTTCATTCCAAGAGCAATGA 906 0.4172 MEFFQKAKVVRLRSYHDKYMLADENQENVFQDRNGCYNNAKWEVEMIENSNFIRLKSCYGKYLTASNMPFLLRGTGKKVLQSLPSRLNSAMEWEPIREGVQVRLRTRYGQYLRGNGGLPPWRNTITHDVPHRTATANWVLWDVDIVELRPKNQPKPRPRPTPITPPISRSLNPTPLCLSPSSSSPSDMDSLVKIDLRSPTTPEPEDSQECLSPVKEGRVIFYNVGNENGDVDDAKKESYFIFKGSCVNELKDKLKEETGLDDVLVCCRNPVTAKLYPLRLQLPPNTCDMHVVLVPSSFQEQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00633 301 MobiDBLite consensus disorder prediction 170 189 - -
Viun4g00633 301 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Viun4g00633 301 SUPERFAMILY Actin-crosslinking proteins 5 145 IPR008999 -
Viun4g00633 301 MobiDBLite consensus disorder prediction 155 169 - -
Viun4g00633 301 Gene3D - 9 126 - -
Viun4g00633 301 MobiDBLite consensus disorder prediction 150 190 - -
Viun4g00633 301 FunFam BnaC05g19630D protein 5 144 - -
Viun4g00633 301 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00633 Viun-Chr4 4203161 4206044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00633 - - vum:124842942 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00633 4 4203161 4206044 Viun5g00622 5 3785249 3786503 PCT