Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00598 ATGCATTGTGCCCCTCAAGAGATAGGTAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCAGTATCAACAATATATCAACAACAACATAAATTCACATCTTTAGAGGGTAGTCAAGAATCTTCTCTTTCAAGGATTAACTCAGATAGTAGGTGTGCCATCATTTCATTCAACTTTGAGCCTGATGGAACTTGGAGAATTGTTGCCCTACCAGGGCAATGTCTCAATTACATTAACTTAGCTGCTGGTGTAAATATGGATGGTGTGCAACTCCTTGTCTCTCCTCCACTTAATAGGTTGAAGATTGATCAATGTAAGGGCCCTAGAGTGCCTCGTCCTTCCTATGCTTATTCAACTAAATCATGTACAAGAAAAAGCTTTACTACCTCAAATGTGCATCGTCGATGTCAAAACAAGATTGCTAGCAGAGCTTCTAAACTCCGACTCAGCGAACTCCCTAACAATTCGAGTTCTCAAACCTCATTAGTAAGCAGCCCTGGTTTGTTCCCTGATAGTTCGGCTGAAGTTAATTCATCTGATAAGTATGCAAGTAATTCTAAGGAAGCCGACAAGACTTTGAAGAAAAACTCAAAAAAACATGCAAAAAAGAAATTTAAACGGAGTAAGAAGAAGCCAAGTGACAGGTCTACTGAACTTGAAGTTCTTCCTGAGGAATTTGTCTGTCCAAGTTTGACTTCTGAAACCTGCAGCAGCAATGTTGGGGATAAGGAGGTCGTGGAAGAATTTTTAACTTCTGATGATAGATTAATAAAATCTGATTGTGACAGAAATGAGATGAATGACAACGTCATAGTTATGGAAGCACCTAACAATAGTAACTCTTATCTTGATCAGGAAGCGATGTCAAAAGATTCTGCACCTATTATTCCAAGTTCTGCTGGAGAATGTGCCACATTTGAATGCAAGAATCAGCTCAAAGGAAGGGGCCCTGAGGCAGTGGTCATTGATAGAGAAATAAAGAACATCCAGCATGTTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTAGTGCTAGATTCAGTTTCAGTTGGTTCCAGAAGTCATGGAGGTATAAATACAAATGATATAGCAAAACAGTCCAACAAGTCAAATTGTACAACCACTTCAGATTCTGGAGACGGATATTTCTTTTGTCAAAACTTGTTGAATGGCATTTACAATAACAGTGAACATACTGAGGGGATTATGCACACTGGTCAAAATTGCATCAGTAATGATAAGAGAGTTAAGCAAAAGAGAACTATGTCGAACAGTTCAGGTTTAAACAAATTTGGGGGTGTTGGAATTTCGCACAGTCGAAAAGGGAAGGAAAACAGTCATTCTGTATGGCAAAAGGTTCAGAAGAATAGTTCTGATGAATGTGGCGGTGATTTGAAGAAAGTAAACACTACTTTTTCACAAATTGCTTCTATTGTGGAAAAGGATCCCTCGGTTATCAAAGAATGTAATTCCGTTGGTGTGAACTGTGTATCAAAAACTGAGGATAAGAAACAAACGAAAATCAAAAATGGTAAGAAATCTAAAGTTAAATTGGACTCAGTATCAAAAAGGGGACAGAGCAATTATTCCAGGAAGAGTTTGCATCTTAACAGGTCTTTGTCAAATGATCATGGGAAGGTTGGTGCTGAACAGAATGATATGTTGCATATCTCAACTCAGGAAATTGATCAGCATGGACTGAACAATGACTCTGGATTTAATTCTGATGTTCACTGCTTGATGGACGGGGTCCAGACCAATGGGGTTGAACAGGTAACATCTGAAAAAATTCACACTGCAGAATTTCATCTGGAGGAGTTAGATCCACAAAATAGTGCCTGCCATACTGTTGCAAACACAAACAAGGAAAGTATAGATAGTGAGGATAGCTTATTAGTAATGCCAGGTGAGATTGTCAATCAATCAAATATGTCTGTGGAGCTGTCTCCAGCTTCTTGCAATCTTGAAGGGGATGAGGTTGGTCAAACAGAGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCAGTGCTCTGGAACCACCCTCTGGAAATGGATACCAGTTGGCAAAAAAGATACAGGGTTTGAAAAATCAGAATCTAATATTTCTCCACCAGATTATTCTGATGCATCCTCTAGGACCAATTTTAACCATGAAAGCAGTGTTGAACCAGAAGTGGCCTCTTTTGAAAGTAAGGATTCTTTACTAAATGCAAGCAGAACATCAAATGGCGAGATTTACAACAATGTGTCTTGTCTAGGTGAGGGTGAGAACCAAAAATTGGGTGGGCAGGTTGCATTTACATTGACAAGGCATAGGGGCAAGCAAGAAGTTTCTGATCACATGTTTAATGAAAGCAAAAAGCAAGAAATGTTAGAAAAGTATTCTTTCAGAATATCCCAAGCTGTGAACGATGCATGTAGGGCACAACTAGCTTGTGAAGTGGTGCACATGGCTACCGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTTCATTTTGGTAGTCCTGTGATTTGTAGATCAGTTGATTCAGTCAGTTGTTCAACCTGCTCACGGAACCATGCTGGTGGTGTCTCCCTGTGCAGACACGAGATCCCTAACCTATCTTTGGGATGCCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGTGCTCTGGATCATGAGAATCCAAAGAGACAAGAAGGTGTTGTTGATTTTCCATTCCGCGCGTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAAAATCAATGTGTAAATAGCAGTGACAAGCTTTCAAATTGTGAGGTTTCCGATGCATGTCAAATGATTGATATTTCAGAAAACTCATCTAGTGCCAGTCAACATTCAATATTTTCTGTTCTCTTTCCTCGGCCTCGTAATCAAGATGCAAGCATTGAAACACCAAATGAGACGGATTCTATCACTAATAGATCTATTCCGTCTATCAACTCAATGTGCTCTGTTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGGCAGCCTCTTTATGAGAAAATACAAGAACTGGTTAGAGGAAATATGCCAATCCATTCTTCAACATATGGGGACCCAACAAAACTGGATTCAATAAAGCTGCGAGATCTTCACCCATGTTCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCGGATGGCAACTTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGAACAGCTTCAGATTTGTCACCATCAGCTTCTTCCATAGTATGTCCACCTGTGGGTCTTCAAAGCTACAATGTCCAGGGAGAATGCTGGTTCAAGCTGAAGCACTCTGCTGAAGCACCACAGATGATGGGCTTAGACCCTTCTTTAGTCCTGAGAGAACGTTTGAAGACACTTGAGGAAACAGCATCTCTGATGGCAAGAGCTGTGGTCAACAAGGGGAAGCTATCATGTACTAACAGACATCCTGATTATGAGTTTTTCTTGTCTAGGAGACGGTATTGA 3555 0.3992 MHCAPQEIGNDSPKVSEARKDSVSTIYQQQHKFTSLEGSQESSLSRINSDSRCAIISFNFEPDGTWRIVALPGQCLNYINLAAGVNMDGVQLLVSPPLNRLKIDQCKGPRVPRPSYAYSTKSCTRKSFTTSNVHRRCQNKIASRASKLRLSELPNNSSSQTSLVSSPGLFPDSSAEVNSSDKYASNSKEADKTLKKNSKKHAKKKFKRSKKKPSDRSTELEVLPEEFVCPSLTSETCSSNVGDKEVVEEFLTSDDRLIKSDCDRNEMNDNVIVMEAPNNSNSYLDQEAMSKDSAPIIPSSAGECATFECKNQLKGRGPEAVVIDREIKNIQHVQPCSFNDIQDSLVLDSVSVGSRSHGGINTNDIAKQSNKSNCTTTSDSGDGYFFCQNLLNGIYNNSEHTEGIMHTGQNCISNDKRVKQKRTMSNSSGLNKFGGVGISHSRKGKENSHSVWQKVQKNSSDECGGDLKKVNTTFSQIASIVEKDPSVIKECNSVGVNCVSKTEDKKQTKIKNGKKSKVKLDSVSKRGQSNYSRKSLHLNRSLSNDHGKVGAEQNDMLHISTQEIDQHGLNNDSGFNSDVHCLMDGVQTNGVEQVTSEKIHTAEFHLEELDPQNSACHTVANTNKESIDSEDSLLVMPGEIVNQSNMSVELSPASCNLEGDEVGQTEKEVSSADYNAQNQCSGTTLWKWIPVGKKDTGFEKSESNISPPDYSDASSRTNFNHESSVEPEVASFESKDSLLNASRTSNGEIYNNVSCLGEGENQKLGGQVAFTLTRHRGKQEVSDHMFNESKKQEMLEKYSFRISQAVNDACRAQLACEVVHMATGGPVAEFERLLHFGSPVICRSVDSVSCSTCSRNHAGGVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISALDHENPKRQEGVVDFPFRAYFVPSLSAVQLFKNHENQCVNSSDKLSNCEVSDACQMIDISENSSSASQHSIFSVLFPRPRNQDASIETPNETDSITNRSIPSINSMCSVDLELLFEYFEFEQPQQRQPLYEKIQELVRGNMPIHSSTYGDPTKLDSIKLRDLHPCSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTASDLSPSASSIVCPPVGLQSYNVQGECWFKLKHSAEAPQMMGLDPSLVLRERLKTLEETASLMARAVVNKGKLSCTNRHPDYEFFLSRRRY 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00598 1184 MobiDBLite consensus disorder prediction 1 21 - -
Viun4g00598 1184 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 9 1183 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 701 727 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 697 734 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 423 448 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 503 549 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 149 184 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 503 522 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 197 211 - -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 523 538 - -
Viun4g00598 1184 Pfam Protein of unknown function (DUF789) 828 1178 IPR008507 -
Viun4g00598 1184 MobiDBLite consensus disorder prediction 148 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00598 Viun-Chr4 3915753 3923107 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00598 - - gmx:100798960 1600.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00598 4 3915753 3923107 Viun4g00598 4 3915753 3923107 ECH