Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00593 ATGGCGTTCACTTGCGCGGCTGCGATCGCTCCCTCTCTCCGCGGCATTGCTCGCATCGGCTTTTGTGACCACAAGGTTTCGCTCGCCGGTTCTCACAGCGAAGTGAATTCGGCGTCGTTTTGCGTTTCGTCGCGTGCGGGGAAGAATGATGTTTTGCTCGAGAGGAGGAAGTTGAAGTCGGCAGATACTCGCGTTGTCGACAATGCGCAGACGAAATCCAGCATTGGAATTGAAATTCCTGTTTCGTGCTATCAGCTCATTGGTGTTCCTGATCGGGCAGAGAAAGATGAAATAGTTAAGGCAGTTATGGGTTTGAAAACTGCAGAAATTGATGAAGGTTACACAGTTGATGTTGTTGCAGCTCGTCAGGATCTTCTGATGGATGTTAGGGATAAGCTTCTTTTTGAGCCAGAATATGCTGGCAACCTGAGGGAAAAGATTCCCCCTAAATCGTCACTTCGAATTCCATGGTCTTGGTTGCCTGGTGCTCTTTGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTAGAGACAGGACAGACAAATCTTCAGCACCAAAATGCCAAGCCATATACTGATGATATGATTCTTTCTATGGCGCTAGCTGAGTGTGCAGTTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCTCAGAGTCTTCTAAGAAGTAAACCATCTCTTTCGAAAATAACACTGCTATATCAGATTGAAGAATCTCTTGAAGAGCTTGCGCCAGCCTGCACCTTGGAACTACTTAGCATGCCACATGCTCCTGAAAATGTTGATAGAAGACGAGGTGCAATTTCGGCTTTGCGGGAATTGCTCAGGCAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGACTGGCCTTCCTTTCTGTGCCAAGCATTTGACAGTTTGCTGGCCAAAGAGATTGTTGATCTTCTTCCTTGGGATAACTTAGCCATGATGCGAAAGAATAAGAAGACGATTGAATCACAGAATCTAAAGGCAGTAATAGATTCTAATTGTTTCTATAGAGTTTTTAAAGCTCATATGGCAATTGGGTTTTCCAGCAAGCAAAAAGAGTTGATTAACAAAGCAAAAGGAATATGCGAATGTTTGATAGTTTCAGAGGGTATTGATTTGAAATTTGAGGAATCTTTTTGCTTATTACTACTTGGTCAGTGCACGGAGGCTGAGGTGGTTGAAAAGCTTAAACAACTTGAGTTAAACTCAAATCCCAAAAATAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCTGCTGTAAACCCATCATTGGAAATTTGGCTGAAGGATTCAGTGCTTGCATTATTTCCGGATACTAAAGATTGTTCTCCAGCTTTGGGCCATTTCTTTAATGCTCAGCAGAAATTTTCTGGAAGCAAGAATTCTAAAGGAGGAGCTCAACAAATGTTGCCCACTATATGTCATAGACCTCTGTCCTCATCTGGTTCCTTGGAACGAAGAGATGTTGAGGAATCTCGCTCATACATGAGCTCTTCTCCTACTGTAGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTACGGAGTTCATTGCTATCAGGTAGAAATGAAAATGTAAGCAATCCTATTGAGCCACCAGTTCAAGTGAAAAGGAACCTTGGTAGTCATCGCGGTTCAGGAATTTGGCATGGTTACTTCCCTCAAGGACACATATTTGGAAGAATAACATACTTTACTGCATTGGGTTGTATTGCATTTGCTTCCATTAAGTTGTCAGGAATTGGCGTAAGCAAGACTCTTATTGGTTCTCATTCGGCTTTTACTAAAGCAAATGGTAACATTAATTGGACCGCAGATTCAGCTGACAACCCTGTACGCCCCGCTTATATTAGGGAAAGTACTGTGACCAACAAACTGAAGAGGATCATTTCGATGTTTAAGATACATTTGTTGCAGCAATCAGGTGCTCGAAATCATGATTTACATACTACCAGTACCTCGTCTTCATCTATTAATATTTCCAGAAGGCCAATGCCTGTGGAAGAAGCAGAAACCATTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTTTGGGACCTAGCCATGAAGTTAATTGCCTAGCTCAAGTTCTTGACGAATCAATGCTTGCTCAGTGGAACGGTTTGGCCACTGCTGCAAAAGAAAGATCTTGTTACTGGAGATTTCTTTTGCTCAAGTTATCCATCATTCGAGCTGACATTCTATCAGATGGAAATGGAGCTGACATGGCAGAAATAGAAGCTCTCTTAGAGGAAGCAGCTGAACTCATTGACGGTTCTCGGCAAAAGAATCCTAATTATTATCTCTCTTACAAAGTCAAGTATGCTATGAAGAGGCAAGACGATGGATCATGGAAGTTCTGTGAAAATGATATAATCGAAACACCATGA 2436 0.4265 MAFTCAAAIAPSLRGIARIGFCDHKVSLAGSHSEVNSASFCVSSRAGKNDVLLERRKLKSADTRVVDNAQTKSSIGIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKTAEIDEGYTVDVVAARQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLRIPWSWLPGALCLLQEVGESKLVLETGQTNLQHQNAKPYTDDMILSMALAECAVAKIGFEKKKVSQGFEALARAQSLLRSKPSLSKITLLYQIEESLEELAPACTLELLSMPHAPENVDRRRGAISALRELLRQGLDVEASCQVQDWPSFLCQAFDSLLAKEIVDLLPWDNLAMMRKNKKTIESQNLKAVIDSNCFYRVFKAHMAIGFSSKQKELINKAKGICECLIVSEGIDLKFEESFCLLLLGQCTEAEVVEKLKQLELNSNPKNNSVLGKAIMDASAVNPSLEIWLKDSVLALFPDTKDCSPALGHFFNAQQKFSGSKNSKGGAQQMLPTICHRPLSSSGSLERRDVEESRSYMSSSPTVGFAVKQLTPTDLRSSLLSGRNENVSNPIEPPVQVKRNLGSHRGSGIWHGYFPQGHIFGRITYFTALGCIAFASIKLSGIGVSKTLIGSHSAFTKANGNINWTADSADNPVRPAYIRESTVTNKLKRIISMFKIHLLQQSGARNHDLHTTSTSSSSINISRRPMPVEEAETIVRQWQTIKAEALGPSHEVNCLAQVLDESMLAQWNGLATAAKERSCYWRFLLLKLSIIRADILSDGNGADMAEIEALLEEAAELIDGSRQKNPNYYLSYKVKYAMKRQDDGSWKFCENDIIETP 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00593 811 Pfam ARC6-like, IMS domain 685 802 IPR025344 -
Viun4g00593 811 Coils Coil 758 778 - -
Viun4g00593 811 MobiDBLite consensus disorder prediction 490 511 - -
Viun4g00593 811 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 29 809 IPR044685 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00593 - - gmx:100801086 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00593 4 3862033 3868059 Viun4g00593 4 3862033 3868059 ECH