Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00557 ATGGAGAAACTCAGGCCAGCGTGGGCTGTCAAGGCAATCATCGTCATTGTTTTCACTTCGACTCTTTTCCGATGCGTCTGCGGCGAGAATCATACCGTCGGCGGAGCCTCAGGCTGGGATCTCAGTTCCAACATCCAGGCCTGGTCATCTACGACAACGTTTAATATCGGAGACGATCTCGTATTCTCGTACACGCCGGTTCACGACGTGGTGGAGGTGAACCAACTAGGTTACGACACGTGTACGATAGCCAACGCGCTTGCCACGTACGATAATGGAGAAACCGTGATTCACTTAGGCGGAGCGGGAACGCGATACTTCGTGTGTGGCCGAATGGGCCACTGTCAACAGGGCCTTAAACTCCAAGTCCAAGTTCTAGCCCAGTCCAACAACGGAACCAACGACGATGAAAACCTAGACCCCGGTACCGCTTCCTCTCCTGCGCCTCGTTCTTCTCCGCCGCCTCCTTCTCCTCCACCGCCTCCTTCTCCTCCACCGCCTCACCGTGTCGAACACTCTCCCGCAGATGAGCCCTCACCCTGCGACTCTTCCGGTACAGACGAGCGTTTTGGGGTGGTGCCGTTAATCACGCTCGTAATCGTGCTCGCTTTCGCCCACGCTCCTTTCTTCTTCGCTTTTCCACGCCTCTGTTTTCATCTCATGCGTTTAAATTTCTAG 678 0.5501 MEKLRPAWAVKAIIVIVFTSTLFRCVCGENHTVGGASGWDLSSNIQAWSSTTTFNIGDDLVFSYTPVHDVVEVNQLGYDTCTIANALATYDNGETVIHLGGAGTRYFVCGRMGHCQQGLKLQVQVLAQSNNGTNDDENLDPGTASSPAPRSSPPPPSPPPPPSPPPPHRVEHSPADEPSPCDSSGTDERFGVVPLITLVIVLAFAHAPFFFAFPRLCFHLMRLNF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00557 225 MobiDBLite consensus disorder prediction 147 169 - -
Viun4g00557 225 Pfam Plastocyanin-like domain 42 118 IPR003245 GO:0009055
Viun4g00557 225 FunFam Blue copper 27 131 - -
Viun4g00557 225 MobiDBLite consensus disorder prediction 130 146 - -
Viun4g00557 225 CDD Phytocyanin 30 125 - -
Viun4g00557 225 Gene3D - 28 131 IPR008972 -
Viun4g00557 225 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Viun4g00557 225 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Viun4g00557 225 PANTHER BLUE COPPER PROTEIN 30 144 IPR039391 GO:0009055
Viun4g00557 225 MobiDBLite consensus disorder prediction 130 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00557 Viun-Chr4 3668828 3670971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00557 13 126 Miscellaneous Gene Families AT2G32300 43.478 3.32e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00557 - - gmx:102664120 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00557 4 3668828 3670971 Viun4g00557 4 3668828 3670971 ECH