Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00346 ATGTCGCTCCACGGCAGCGACCGCCGCGACACGTCGAGCGCCGGCGGAAACGGCACCGTGGCGGCGGCGAGTCTGAGGCTGCGGCTGAACCCTAACAAGGAGCACAAGCCAGATGGCTACGAGGACCTGCAGTTGGATTTCAGCCCTAATATCTTCAGCTCCTTGGAGAGGTACCTCCCTCCAAGCATGCTGAACGTGCCTCGTGACGATAAGGCCAAGTTCATGCGCGAGATTCTGCTCAAGTATCTACCCCTTGGGGAACGCAGCAGACCTCTACATCGGGAGTTGTACTCTGTGAATCCTGCTACATTCTTCGTTCCCTCATTTCTGAGAGCAATTAATGATAATACTGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCCTCTCCCGGCATTTTTATATTTGACATATTTCAGACCAACTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCCGTACTAGATGACTTTGGACTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCGGAAGTTGGTGGGGCAACCCTCGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATACGTTGTGAGAAACATGTAAATACTGGAACTCATTCAGAGGAGATCTTTGATTATTCTCATGTTCCTGGACGAGCTGTGCTTCATCGTGGTCGACATCGCCATGGTGCTAGAGCTACAACATCTGGCAATCGGGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTCAGGGAGATGAAACGGTATCAAAAAGATTTCTCCAGCTGGTGTGGCGAGTGCAGTCGTGAGAAAAAGGAAAGGCAACGGTCAACAATTGCTGCTACCAAATTGGAGTTGTTCAGGAAGGAAGGTGAATCCACTGCATAA 1077 0.4652 MSLHGSDRRDTSSAGGNGTVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVPRDDKAKFMREILLKYLPLGERSRPLHRELYSVNPATFFVPSFLRAINDNTEQSFRSIMSEPSPGIFIFDIFQTNFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGTHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRKEGESTA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00346 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 211 310 IPR005123 -
Viun4g00346 358 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 18 347 - -
Viun4g00346 358 SMART p4hc 130 309 IPR006620 GO:0005506|GO:0016705|GO:0031418
Viun4g00346 358 MobiDBLite consensus disorder prediction 1 19 - -
Viun4g00346 358 Gene3D q2cbj1_9rhob like domain 130 310 - -
Viun4g00346 358 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00346 Viun-Chr4 2217399 2224799 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00346 - - gmx:100816390 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00346 4 2217399 2224799 Viun4g00346 4 2217399 2224799 ECH