Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00281 ATGAACAGTGGAAGCGGCGCAAACATGGTTCGGCGCAAGCGTCGGAGGCATTCACCGGAAAATTCTCCGTCAAAACGAAGAAGACGTTCTCAGTCTGAACGTCGGAGTAGGAGATGGGTTGTCTCTTCCAAAGACTCTTCAAATTGCACGGATAAAATTGTGGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATCTGGATCTGTATTCTAATATTCCACATAGGTTCTTGGAGTGGGACAAGCGGAAAAGGCTCATACTTGAAGAGATTAACAACTATAATGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCCAGAACAGTGGCTTTAAAGGAACTTACAAGGCTCGCACTGGGGAAGCAAAAGATGGATGTGCTGTATTTTGGAAAGACAAATTATTCAATCTTCTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGCAACAATGTTGCCCAGCTGTGTATTTTGGAGGCAAACCGTGATAAAAAAGAATCTGACGCATGTAACCTAACCACAATGGAACCATCCACAGGAAAAAGAAGATTTGTTGTGGGAAACATACATGTGCTATTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGACTTGAATAGTGTTCCACAGAGTGCCATATACCAGTTTCTGTCTTCGTCAAAGTTAGACATCCAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGTCCAGTAGACTCTTCAGATCACAGATTCGTGATGATGCTAGCATTTCGATGACTCTTTCAAGGCAATTGCTATATAGATGGAGTGTGGAAGAACTAAGAATTGCAACAGGGGCGAAAGGAATCACTCAACTTCAGCACCAGCTCAAACTCCGCAGTGCTTATAGTGGTGTTCCTGGAGACCGTAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGATGATCTTGTTCCACTTAGAGTTCTTGAAACCTTGCCAATTGATATTCTTAGAAGATCTGGAGGACTCCCCAGTGAGAAATGGGGAAGTGATCACCTAGCTGTTGTATGTGAGTTGGCTTTTAGCAAACAACAACAATGCTGA 1242 0.4235 MNSGSGANMVRRKRRRHSPENSPSKRRRRSQSERRSRRWVVSSKDSSNCTDKIVVVSYNILGVENASNHLDLYSNIPHRFLEWDKRKRLILEEINNYNASILCFQEVDHFNDLDNLFQNSGFKGTYKARTGEAKDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCILEANRDKKESDACNLTTMEPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYQFLSSSKLDIQLHDRRNMSGQLEIQSSRLFRSQIRDDASISMTLSRQLLYRWSVEELRIATGAKGITQLQHQLKLRSAYSGVPGDRRTRDDIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00281 413 Gene3D Endonuclease/exonuclease/phosphatase 25 413 IPR036691 -
Viun4g00281 413 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 8 407 - -
Viun4g00281 413 MobiDBLite consensus disorder prediction 9 34 - -
Viun4g00281 413 Pfam Endonuclease/Exonuclease/phosphatase family 57 398 IPR005135 GO:0003824
Viun4g00281 413 SUPERFAMILY DNase I-like 52 406 IPR036691 -
Viun4g00281 413 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00281 Viun-Chr4 1635224 1641939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00281 83 257 EF-hand Containing Proteins AT5G54130 25.543 4.23e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00281 - - vra:106769764 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00281 4 1635224 1641939 Viun4g00281 4 1635224 1641939 ECH