Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05700 ATGGCTAATGGTCTTGGCATGTTATCTTTGCATCAAAGAAATGCAACTGAGCTTCGTGTTCCCAGAAAGGAACATTCTCACTTCCTTTCACACGTTTCTGTTTCACACACTCAAGCCATATTCCAAACCCCAATTTATGTCTCCATTTTCCTTCTGTTCTGCCTAACCTCTCTCTGCACATTCTTCTTCTCTGTCGCTTACATGACCGCCGGTGCAATGGCGACGGCTGCCGGAGCCGCGGTGACGCTGTACCTCTTGTTGAGGCGGAGGAAGAAGGCCGAAGAGGAGTGGTCGAGAGCGCGGACCCTGAGGGTGAGGCCAGCTCAGGCGCCGGCGAATCTGTTCGAATCGATCGTGACGTTGTCGGAGACGCTGAGATTCACTTACTCGGAGACTATTGGGAAATGGCCAATCGCAGACTTGGCCTTCGGCATCAATTCCTTCATGCGCAAACAGGGTGATTTGGCAGTTGCGAGTGTGTATGGTGGAAGTGGTTGTGTGGAGTTGAAAGGCCCTGAAGTTGTAGCGGACTTAGAGGAACTATTGAGGCTGTTGACTCTGTGCATGCTTTTCTCCAAAAAACCATTTCCCGATTTTTTAGATTCTGCCGGATTCTCACAGGACCATGTCCTTCTCCACAGCCCCAAAGCTGAGCTTCTGAAGCCCGCTTTCACTATTATACATGATATGCAATCAAGATGTTTTCTTCTGTTGATCCGGGGAACTCATAGTATAAAAGACACACTGACAGCTGCAACTGGTGCTATGGTTCCTTTTCACCATTCCATTCTAAGTGATGGACAAATAAGCAACTTGGTTTTAGGACATGCACACTGTGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAACTCTGCACTCCTACATTACTTAAGGCTCTTAATGAATGTCCAGACTCAAAAGTCAAGGTTGTTGGACACTCACTTGGTGGTGGTACTGCATCACTGTTGACATATATTCTTAGAGAACAAAACGAATTATCTTCAACCACCTGTGTCACATTTGCTCCAGCTGCGTGTATGACATGGGAGTTAGCGGAATCAGGGAAGCACTTCATCACCACCATTATAAATAATTCCGACATGGTGCCCACATTATCATCTTTCTCTGTTGATGATCTTCGTTCTGAGGTTGCTGCATCTTCTTGGTTGAATGATTTATGGAATCAGGTTGAGCATACAAAGGTTCTGAATGTCATCTATCGCTCTGCAAGTACCCTTGGATCTCACTTACAATCTATATCCAGTGCAAAAGACAAGGTAACTGGTGTAGGTGCTATTCTACTGCCAGTAGCCAGTAGTACCCAGGTTGTGATAAAGCATGCACAAAGTGTTGCAAAAGCTGTTGTCAAAACTATGGCTAAACACAGTCAGAATATTGGTCCGTTGTCGAAATCTAAATTAAATAACTTGGTCAAAGTTTCTCTTGAACCAGAAAATATAAGTAATTCTCTTTTGACTGAGAGTGTGTCTGTACTTAATAAAGATGAACCAAACTCCACAAGTGGAAAATCTGAACCTGATGTGGCAGATGAAGATAAACTAGTCATTGATGCCAATGAACACATCACAGAAGGTGAATTGTGGCATGAACTGGAGAAAGAACTTGAAAAACAGACTATATTGAACATCCTGACTCAGATAGAAGAAGCAGCTGCAGAAAAAGAGATAATTGAGGAAGAAAATCAACTTATTAATGCTAGCAATTCAATCTCAACATCTGACCTTGTAGATAATAGTTATTGTTTTTATCCCCCAGGTAAAATTATGCATATGGTCTCTGCACCTTCTGATGAATCTGGTTCAAATTCCAAGGAGGGACATATCAAATTATATGAAACACCAAGACAGCTGTATAGCAAGTTCAGACTACCAAAAAAAATGATAAATGATCATTACATGCCAACATATAGGACAATGATCCAACAATTAATCCAAGAATTAAAGAAAGATGGTGTCAAACAGTACTAA 1989 0.4258 MANGLGMLSLHQRNATELRVPRKEHSHFLSHVSVSHTQAIFQTPIYVSIFLLFCLTSLCTFFFSVAYMTAGAMATAAGAAVTLYLLLRRRKKAEEEWSRARTLRVRPAQAPANLFESIVTLSETLRFTYSETIGKWPIADLAFGINSFMRKQGDLAVASVYGGSGCVELKGPEVVADLEELLRLLTLCMLFSKKPFPDFLDSAGFSQDHVLLHSPKAELLKPAFTIIHDMQSRCFLLLIRGTHSIKDTLTAATGAMVPFHHSILSDGQISNLVLGHAHCGMVAAARWIAKLCTPTLLKALNECPDSKVKVVGHSLGGGTASLLTYILREQNELSSTTCVTFAPAACMTWELAESGKHFITTIINNSDMVPTLSSFSVDDLRSEVAASSWLNDLWNQVEHTKVLNVIYRSASTLGSHLQSISSAKDKVTGVGAILLPVASSTQVVIKHAQSVAKAVVKTMAKHSQNIGPLSKSKLNNLVKVSLEPENISNSLLTESVSVLNKDEPNSTSGKSEPDVADEDKLVIDANEHITEGELWHELEKELEKQTILNILTQIEEAAAEKEIIEEENQLINASNSISTSDLVDNSYCFYPPGKIMHMVSAPSDESGSNSKEGHIKLYETPRQLYSKFRLPKKMINDHYMPTYRTMIQQLIQELKKDGVKQY 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05700 662 Pfam Lipase (class 3) 237 374 IPR002921 GO:0006629
Viun3g05700 662 Gene3D alpha/beta hydrolase 191 419 IPR029058 -
Viun3g05700 662 CDD Lipase_3 193 379 - -
Viun3g05700 662 Coils Coil 547 576 - -
Viun3g05700 662 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 73 656 - -
Viun3g05700 662 Pfam Lipase 3 N-terminal region 105 182 IPR005592 GO:0016042
Viun3g05700 662 SUPERFAMILY alpha/beta-Hydrolases 202 375 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05700 Viun-Chr3 62549315 62553672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05700 68 657 Acyl Lipid Metabolism Gene Families AT4G16070 54.079 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05700 - - gmx:100801263 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05700 3 62549315 62553672 Viun3g05700 3 62549315 62553672 ECH
Viun3g05700 3 62549315 62553672 Viun9g00130 9 791515 796192 PCT