Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05625 ATGAACGCCGATAATGGTTCAGGAAGTGCGACTCTTGACAACGTACCCACGCAAATGGATTCCGATAGTCAGGTAAAAGACAAGGAAAAGGAAGAACTCACCGAGACTATGAACAAGCTGCATATCGAAGGATCTTCTTCTGGGAATGGATTTCCTAACTTCCGAAGAAAACCTGTCATCATTATTGTTGTAGGAATGGCAGGGAGTGGGAAAACGACACTCATGCACAGGTTGGTTGCCCATACACATATAAAAAACATCCGGGGTTATGTGATGAATCTTGACCCTGCCGTCATGACCCTCCCATATGGTTCTAACATCGATATAAGAGACACTGTTAAATACAAAGAAGTCATGAAGCAGTTTAATCTTGGCCCTAATGGTGGAATTTTGACTTCCATGAACTTGTTTGCCACCAAGTTTGATGAGGTAATCTCTGTGATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTAGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCCTATGTAGTTGATACACCTCGTTCAGAAGATCCTACAACTTTCATGAGCAACATGTTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTCATCCTGACATTCAACAAAGTTGATGTAGCTGCACACCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGCAAGTTCAGATCAGTCATACACATCAACTTTAACTCAAAGCCTTTCTCTTGTGCTAGATGAATTCTACAATAATTTGAAATCAGTTGGAGTTTCTGCTGTTTCTGGTGCAGGAATGGAAGACTTCTTTAAGGCTGTCGAAGCCAGTGCAGATGAATACATGGACACCTACAAGACTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTAGAAGAAGACCGTAGGAGGGGTGACATGGATAAACTGAGGAGAGACATGGAGAAATCCGGGGGAGAAACTGTAGTTTTGAACACTGGTTTGAAGGACAAAGAGAAAAGTAAAAGTATGATGGATGAGGAAGATGAGGTTGAGGAGGACGAGGAGATAGATGATGATGATGATTCTGGGATATATACTGAAGATGATGATGTTATAGATGAGGATGAAGATGAGGAGGTTGCTAAGTTTGGCTTATGA 1212 0.4208 MNADNGSGSATLDNVPTQMDSDSQVKDKEKEELTETMNKLHIEGSSSGNGFPNFRRKPVIIIVVGMAGSGKTTLMHRLVAHTHIKNIRGYVMNLDPAVMTLPYGSNIDIRDTVKYKEVMKQFNLGPNGGILTSMNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQAAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGMEDFFKAVEASADEYMDTYKTDLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKEKSKSMMDEEDEVEEDEEIDDDDDSGIYTEDDDVIDEDEDEEVAKFGL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05625 403 Pfam Conserved hypothetical ATP binding protein 63 301 IPR004130 -
Viun3g05625 403 MobiDBLite consensus disorder prediction 1 32 - -
Viun3g05625 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 298 IPR027417 -
Viun3g05625 403 MobiDBLite consensus disorder prediction 316 342 - -
Viun3g05625 403 MobiDBLite consensus disorder prediction 363 403 - -
Viun3g05625 403 PRINTS Transforming protein P21 ras signature 219 232 - -
Viun3g05625 403 PRINTS Transforming protein P21 ras signature 279 301 - -
Viun3g05625 403 PRINTS Transforming protein P21 ras signature 59 80 - -
Viun3g05625 403 MobiDBLite consensus disorder prediction 1 21 - -
Viun3g05625 403 MobiDBLite consensus disorder prediction 316 403 - -
Viun3g05625 403 Gene3D - 58 316 IPR027417 -
Viun3g05625 403 CDD GPN1 59 299 IPR030230 GO:0003924
Viun3g05625 403 PANTHER XPA-BINDING PROTEIN 1-RELATED 62 319 IPR004130 -
Viun3g05625 403 Coils Coil 305 325 - -
Viun3g05625 403 FunFam GPN-loop GTPase 1 58 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05625 Viun-Chr3 61913590 61917162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05625 K24104 - gmx:100797318 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05625 3 61913590 61917162 Viun3g05625 3 61913590 61917162 ECH