Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05619 ATGAAGCCACTATCTTTTATTTTTTACGCTGTTGTTATAACAACAATTTCGGTGCCAACAGCAACTAACTGCAGAGTCGTTCTGCTAAACAAGGCCAATCTGATAGAAGAAACATGCAAGCAGACACCCCATCAGAACCTTTGCATCCAATACCTCTCCTCTGACCCTCGCAGCGCCGATGCAGATATCGAAGGGCTAGCTCTGATCATGGTCAATGTAATCAAAACCAAAGCAAATAATGCCTTGGACAAGATCCACCAACTTCTTCAGGGAAGCCCTGAACCTGGTCAAAAGGAATCACTGAGTTCTTGTGCTGGTAGATACAAAGCAATTCTGGAAGCTGACGTGGCACAAGCCATTGCTGCTCTGCAGAAAGGAGACCCCAAATTCGCAGAAGATGGTGTGAATGATGCTGCTGTTGAGGCCACCTCTTGTGAGAACAGTTTCTCTGGGAAATCGCCACTCACTGATGAGAACAGTGCCACGCATGATGTTGCAGTCACAACAGGAGCTATAGTTAGACAATTGCTCTAG 534 0.4607 MKPLSFIFYAVVITTISVPTATNCRVVLLNKANLIEETCKQTPHQNLCIQYLSSDPRSADADIEGLALIMVNVIKTKANNALDKIHQLLQGSPEPGQKESLSSCAGRYKAILEADVAQAIAALQKGDPKFAEDGVNDAAVEATSCENSFSGKSPLTDENSATHDVAVTTGAIVRQLL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05619 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 177 IPR035513 -
Viun3g05619 177 CDD CIF_like 32 176 IPR034087 GO:0004857|GO:0043086
Viun3g05619 177 FunFam Invertase/pectin methylesterase inhibitor family protein 30 177 - -
Viun3g05619 177 Pfam Plant invertase/pectin methylesterase inhibitor 33 164 IPR006501 GO:0004857
Viun3g05619 177 SMART PMEI_2 30 172 IPR006501 GO:0004857
Viun3g05619 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 166 - -
Viun3g05619 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 176 IPR035513 -
Viun3g05619 177 NCBIfam pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05619 Viun-Chr3 61888857 61890098 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05619 - - gmx:100306719 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05619 3 61888857 61890098 Viun3g05619 3 61888857 61890098 ECH