Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05616 ATGCTTATCTTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCACTCCGGTCGTTGTGGCATGGATATACTCGGAGATATTGGAGTATCGGAAAAGCTCGGTCTCGTCTAGAGCTGGTCACTCGGATATCAAATTGGTTGAAATGGGTAGTGATGCTGTTAAAGATGAAGACAAAGCAGTTTTATTGGAGGGAGGAGCTCTACAATCAGGATCCCCGAGGGCGCGGAGCATAACTGCCTCACCATCAATTATCCGATTCCTTTTGATGGATGAATATTTCCTTCTTGAAAACCGTTTGACACTCAGAGCGATGTCTGAATTTGGTCTCCTTTTGGCTTACTTTTATCTTTGTGACCGCACGGATTTCTTTGCCTCGTCAAATAAGAGTTACAATAGGGATCTCTTCCTATTTCTCTATTTTCTCCTCATAATAGTTTCGGCAATCACTTCCTTTAAGATACATCAAGACAAGTCACCATTTTCTGGGAAATCCATCCTTTATTTAAATAGACACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTAATGTACCATTACTTTGCTGCATCTGAAATCTACAATGCAATCCGTTTGTTCATTGCCGCATATGTTTGGATGACTGGATTTGGGAACTTCTCGTATTATTATGTTCGTAAAGATTTTAGTCTGGCCAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTTGTGGTGTTCTGTTGTATTGTACTCAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACACTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTCAACAAGTACAATGAGATTGGGTCAGTCATTGCTGTGAAAATCATTGCTTGCTTCTTGGTTGTTATCTTAGTATGGGAGATACCTGGAGTCTTTGAATGGCTTTGGAGTCCATTTACTTTCCTTCTTGGTTATACTGATCCAAATCCTGCCAAATCACATCTTTCCCGCTTGCATGAATGGCATTTTCGCTCAGGTCTTGATCGCTACATATGGATAATTGGCATGATTTATGCCTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCAGAAATCAAGCGCAGAGTATCAATCAAAGCAGCTGTTGTGCTGATATGCTCATTGGTTGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAGCTTTCATACAATAAATACCATCCTTATACCTCGTGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTCACACAAAGTTTCCGTAGCTATACTCTGACACTTTTTGCATGGCTTGGGAAGATTACACTGGAGACTTACATCTCCCAGATCCATATCTGGTTAAGGTCAGGTGTTCCAGATGGACAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATTTCCTATAGGCTTTTTGACCTGACAAATATACTCAAGGTGGCATTTGTACCCAGCAAAGACGACAAGCGTCTTGTACACAATTTAATTACAGCAACAACAATCTCAGTTGTTTTATATTCTTTGTCCCTCGGCTTCCTTTGGGTACCTCAAATGTTGGTTTGA 1641 0.4089 MLIFSPVTPGQVSFLLGITPVVVAWIYSEILEYRKSSVSSRAGHSDIKLVEMGSDAVKDEDKAVLLEGGALQSGSPRARSITASPSIIRFLLMDEYFLLENRLTLRAMSEFGLLLAYFYLCDRTDFFASSNKSYNRDLFLFLYFLLIIVSAITSFKIHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVVFCCIVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKIIACFLVVILVWEIPGVFEWLWSPFTFLLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRVSIKAAVVLICSLVGYLWFEHIYKLDKLSYNKYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFDLTNILKVAFVPSKDDKRLVHNLITATTISVVLYSLSLGFLWVPQMLV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05616 546 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 528 - -
Viun3g05616 546 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 519 IPR012419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05616 Viun-Chr3 61870823 61876918 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05616 K03377 - gmx:100794337 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05616 3 61870823 61876918 Viun3g05616 3 61870823 61876918 ECH