Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05547 ATGAAGCAAAAGACGCCATCTTCACCAATCACTGCAAGAACTGCGTTGAAGAAGCAAGGTGACAACAATAACAACAACAACAACAAGTCCCTGCAGAGTCCATCGCAGCCACGCCTCAGAGCTTCTTCCAAGGCTCCAAAGTCACCACCAGAGTCATCAACCAGAGACAAGTCAGTGCCCCCGGACTTGAAGGACGATTCAAGGGCCAAGAGGGGTGCTGCTGTGGGGTCTCGAAAGGGTAGGGAAGCTGAGGAGGCTAAGGTTGTTGTTGTTTCTCGGCCACGGCGAAGGCTTGGGGATTTCGGTTTGAGGAAGAGTGGAGATGATGATCCTGATGGGAAGAAGAGGAAGGAGTTGCAGGATAAGCTCGAGGTGAGTGACAATTTGATCAAGAGTTTGCAATCTGAGGTGCTGGCGTTGAAGGAGGAATTGGATAGAGTAAAGAGCTTGAATGTGGAGCTTGAGTCCCAGAACACAAAGCTCACTCGGAACCTTGCTGCTGCTGAAGCTAAGGAAGCAACTGTTGGCACTGGAAACAGTGGAAAGAAGGAGCCAATAATAGGAGAACACCAGAGTCCCAAGTTTAAAGACATACAGAAACTCATTGCTGACAAATTGGAATTGTCTAGAGTGAAAAAGGAAGGTACTCCTGAAGTTAATTTTGCCAAAGCATCAATTCCTTCACCAACCAGAAGTTTTTCCATTCATGAAACTAAGAGTATAGGAAGAAAATCTCCACCCAATATGTGCCTGCAGCCACCTCCACCACCACCGATTATAGGAAGAAATTCTGCACCCAGCACATGCCAGCAGCCCCCTCCGCCACCTCCACCACCTCCAATTCCATCTCGGCCTTCAGCAAGATTATCTAACACCCAAAAGGGTGCTGCAATTGTTGAACTATTTCACTCATTAAAGAATAAAGATGGGAAGATAGACTCAAAAGGACCTGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTGGGAGAAATTCAAAACCGTTCAGCTCATCTCTTAGCCATAAGGACAGATATTGAAACAAAAGGAGAGTTCGTTAATGACCTCATAAAGAAAGTAGTAGATGCAGCATTCACGGACATTGAAGAGGTCTTAAAGTTTGTTAATTGGCTTGATGGAAAACTATCATCATTGGCTGATGAACGTGCTGTCTTGAAGCATTTTAAGTGGCCCGAGAAGAAAGCTGATGCATTGAGAGAGGCTGCAATTGAGTATCATGAACTCAAAATGCTAGAACAGGAAATTTCCTCCTACAAGGATGACCCTGATATTCCATGTGGAGCTGCCTTAAAAAAGATGGCCACGCTATTAGACAAGTCTGAGAGGAGAATACAGAGGCTAATCATGCTACGAAGTTCAGTCATACATTCATATCAAGTGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAGCAATATAAAGCAGGCTTCCATGACCCTGGTCAAGATGTACATGAAAAGAGTGACAATAGAGCTTGAATCCATTCGCAATTCCGACAGAGAATCTATTCAAGATTCTCTTCTGCTTCAGGGGGTGCATTTTGCATACAGAGCCCATCAGTTTGCTGGAGGATTGGACTCAGAAACAATGTGTTGTTTTGAAGAGATACGGCAACGTGTACCAGGACACCTAGCAGGGTCTCGAGAACTTTTGGCTGGCATACCATAA 1713 0.4489 MKQKTPSSPITARTALKKQGDNNNNNNNKSLQSPSQPRLRASSKAPKSPPESSTRDKSVPPDLKDDSRAKRGAAVGSRKGREAEEAKVVVVSRPRRRLGDFGLRKSGDDDPDGKKRKELQDKLEVSDNLIKSLQSEVLALKEELDRVKSLNVELESQNTKLTRNLAAAEAKEATVGTGNSGKKEPIIGEHQSPKFKDIQKLIADKLELSRVKKEGTPEVNFAKASIPSPTRSFSIHETKSIGRKSPPNMCLQPPPPPPIIGRNSAPSTCQQPPPPPPPPPIPSRPSARLSNTQKGAAIVELFHSLKNKDGKIDSKGPVNHQRPVVISAHSSIVGEIQNRSAHLLAIRTDIETKGEFVNDLIKKVVDAAFTDIEEVLKFVNWLDGKLSSLADERAVLKHFKWPEKKADALREAAIEYHELKMLEQEISSYKDDPDIPCGAALKKMATLLDKSERRIQRLIMLRSSVIHSYQVYNIPTAWMLDSGIMSNIKQASMTLVKMYMKRVTIELESIRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDSETMCCFEEIRQRVPGHLAGSRELLAGIP 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05547 570 MobiDBLite consensus disorder prediction 57 120 - -
Viun3g05547 570 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 21 557 IPR040265 -
Viun3g05547 570 Coils Coil 116 171 - -
Viun3g05547 570 MobiDBLite consensus disorder prediction 248 285 - -
Viun3g05547 570 MobiDBLite consensus disorder prediction 240 290 - -
Viun3g05547 570 MobiDBLite consensus disorder prediction 1 55 - -
Viun3g05547 570 SUPERFAMILY Formin homology 2 domain (FH2 domain) 253 462 - -
Viun3g05547 570 MobiDBLite consensus disorder prediction 171 192 - -
Viun3g05547 570 MobiDBLite consensus disorder prediction 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05547 Viun-Chr3 61308994 61316328 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05547 - - gmx:100820135 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05547 3 61308994 61316328 Viun3g05547 3 61308994 61316328 ECH
Viun3g05547 3 61308994 61316328 Viun9g00567 9 4219222 4225439 PCT