Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05509 ATGTTTAGATTAAAGAACTGTGAAGGCCCTGTGCGGTTCTTGTATCAGCAAGCTCGGCATCACTCTCACCATAACAATCTCATGGCTTATTTAGTAGGTTTCGATCCTTGCTCTCGCTTGAGCAGGGCCTTTTCGCAGTACCCTTCTCTCTCTTCTTCTGATCGTGGCTGCTATTTGTCTTTCCCACTTCTCCATAAACTTGTTTATGCTAATGTTTTTGGGGTTAGAAGAAGCATTGGTTTTGGTCGTAGAGGTTGTGGCTTTGATACTAATGGTAGTTGTAGTGGTAATGGTGATTGGATCTTTGTGAGGGCTAAGGCGAGGTCCCGTGGCTTTGCATCGAATCGTCACCCCCCGATGTTGGCTGATTTGGAGCGAAGGAATTCTGTTAAGGGTGACGAATTTGATGCTACTGTGATCAAGATTGATAACGGATCTGTAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCACCGGTTGTCCCAGAAAGTGGTTGTTGCCGTTGATGTTGATGAGGTATTGGGAAACTTCGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCCAATTATTCAGTTTCTGAATATCATGTATACGAGTTTTTTAAGATATGGAATTGTTCACGTGATGAAGCTGACATCCGTGTACATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCATACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGTAATTAAGGATCACACAATCGAGTGGATAGAGAAGAATTTTCCTGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATCGATGATAACCCTCGTTATGCCCTAGAGTGTGCTAATGTTGGAATTAGGGTCCTGCTCTTTGATTATGAAAATTCATATCCTTGGTGCAAGAGCGAGTCTGCGGAAGAACACCCTTTGGTGACCAAAGTAAAGAACTGGGACGAAGTGGAACAACAATTAATGTCATTGATTGCCTCTTAG 1107 0.4228 MFRLKNCEGPVRFLYQQARHHSHHNNLMAYLVGFDPCSRLSRAFSQYPSLSSSDRGCYLSFPLLHKLVYANVFGVRRSIGFGRRGCGFDTNGSCSGNGDWIFVRAKARSRGFASNRHPPMLADLERRNSVKGDEFDATVIKIDNGSVNGSPAKPPCFNDHRLSQKVVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNVIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYALECANVGIRVLLFDYENSYPWCKSESAEEHPLVTKVKNWDEVEQQLMSLIAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05509 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 361 IPR010708 GO:0008253|GO:0009264
Viun3g05509 368 PANTHER NUCLEOTIDASE YQFW-RELATED 75 367 - -
Viun3g05509 368 Gene3D - 215 365 IPR023214 -
Viun3g05509 368 SUPERFAMILY HAD-like 160 363 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05509 Viun-Chr3 60995515 61001038 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05509 - - gmx:100793947 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05509 3 60995515 61001038 Viun3g05509 3 60995515 61001038 ECH
Viun3g05509 3 60995515 61001038 Viun9g00548 9 4067107 4070534 PCT