Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05454 ATGACTGCGAACACAAACACGACGCCGATCGTTGGGAAACTGTACTGTTCATCGTCTCAGACGGTGCATGTGGTGAGGAAGAGGCCACACGTGGTGAATGGTGGTGGTTTTGTGGTGATGGATTCTAGTGGCCAGAGGGTTTTGTTCAGAGTCGATGGTTGTGGTGTTCGTGGCAAAAAGGGAGACTTGATCCTCAGAGAAGGAGATGGAGACGCTTTGCTTCTCATGCTTCGGAAGGGAGGCATAGTTGAGGCCTTGAGCATTTACAAGAAGTGGAAAGGTTACAGTTTAGACTACGAAGGAACACGGAAACTAGTTTTCAGCTTGAGAGAACCCAATTCTTGTTTGTTTAAGAACAAGGCAATCAGAATCTTTACGAGGAACAGAGGGTGTGATTTTAAGATCAGTGGGTATTTCCCGGACAAGTGTTGTAGCATTGTAGACTCAAAAGGCAACGAGGTAGCACAGGTGAGGGTGATGAAGGAGGTGGAGGAGTTGGTGGAAAACAAGGATTTGTATCATGTGGTGGTGAAACCTGGGATGGATCAAGCTTTTGTTTTTGGAGTCATAGCTATTCTTGATCACATTTATGGGGAATCTACCCACTGCTGA 612 0.4624 MTANTNTTPIVGKLYCSSSQTVHVVRKRPHVVNGGGFVVMDSSGQRVLFRVDGCGVRGKKGDLILREGDGDALLLMLRKGGIVEALSIYKKWKGYSLDYEGTRKLVFSLREPNSCLFKNKAIRIFTRNRGCDFKISGYFPDKCCSIVDSKGNEVAQVRVMKEVEELVENKDLYHVVVKPGMDQAFVFGVIAILDHIYGESTHC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05454 203 Gene3D - 8 201 IPR038595 -
Viun3g05454 203 Pfam LURP-one-related 10 192 IPR007612 -
Viun3g05454 203 PANTHER - 22 198 IPR007612 -
Viun3g05454 203 SUPERFAMILY Tubby C-terminal domain-like 9 197 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05454 Viun-Chr3 60521649 60523038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05454 - - gmx:100306504 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05454 3 60521649 60523038 Viun3g05454 3 60521649 60523038 ECH
Viun3g05454 3 60521649 60523038 Viun9g00488 9 3478620 3479822 PCT