Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05417 ATGGAAGGAGACACATTCTCTGGTCTCGGCAACGGTACACAGATTGATAACAAGATCTTGCAAACGTTTAAGAAAAGCTTTGTTCAAGTCCAGGACATCTTGGATCAGAACCGGGTACTCATCAATGAGATAAACCAGAATCACGAGTCCAAGGTCCCTGACAATCTCAGCAGAAACGTTGGCCTTATTAGGGAGCTTAACAACAACATCAGAAGAGTGGTTGACCTTTATGCGGATCTTTCGAGCTCCTTTACCAAATCCATGGAGGTTTCTTCCGAAGGGGATTCCAGTGGTGCTGTAAAATCTGACGGCAAAGCTGGCCACAAACGACACAGGCCTCTTTAG 345 0.458 MEGDTFSGLGNGTQIDNKILQTFKKSFVQVQDILDQNRVLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRPL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05417 114 PANTHER PROTEIN ELF4-LIKE 4 12 112 IPR040462 GO:0042753
Viun3g05417 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Viun3g05417 114 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05417 Viun-Chr3 60258841 60259822 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05417 - - gmx:100817992 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05417 3 60258841 60259822 Viun3g05417 3 60258841 60259822 ECH
Viun3g05417 3 60258841 60259822 Viun9g00466 9 3271540 3273151 PCT