Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05279 ATGGGGGCTTGTTTTTCTTGCGACTCATCCTCCATATTGAAGCATATCCGTGTGGTTCATATGAACGGTTATGTGGAGGATTTTGAGCAACCAATTTCAGTGAGGCAAGTAATTGGGCACCCCTCAAAACACTTTCTCTGCACTTCTACTCAGCTTCTTTCCGCTTCCTCAAAATCAATGACCGGAGACACACACCTTCAACCTGGGCAAGTCTATTTCATGCTGCCATATTCAGTGCTACAAGCTGATGTTTCTCCGGTGGACCTTGCTGGCCTTGTAAAGAAACTCAGCGCAGTAGCCAAAGCATGTCCTTTGTCCACCCAAAATCAACCTGTAAGAGGTGGTTCGGCAGAGCAATATGGTGTTGGTAAGATGAACATTGGTGGAAGAAGCCCTTGCAGAGTACAACCTTGGAAACCTGTGTTGGACACCATATCAGAGAAGCCATATCATAGGAGGAGTGAATCGGATTGGCAAGAATGTTATTGA 489 0.4581 MGACFSCDSSSILKHIRVVHMNGYVEDFEQPISVRQVIGHPSKHFLCTSTQLLSASSKSMTGDTHLQPGQVYFMLPYSVLQADVSPVDLAGLVKKLSAVAKACPLSTQNQPVRGGSAEQYGVGKMNIGGRSPCRVQPWKPVLDTISEKPYHRRSESDWQECY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05279 162 Pfam PADRE domain 1 147 IPR025322 -
Viun3g05279 162 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05279 Viun-Chr3 59283573 59284416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05279 - - gmx:100785670 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05279 3 59283573 59284416 Viun3g05279 3 59283573 59284416 ECH
Viun3g05279 3 59283573 59284416 Viun9g00339 9 2323105 2324052 PCT