Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05252 ATGAGTACCGAAAAGATTCCTTCGGCAGCTTCTGTTTCTTCGTCTTCTTCTTCCACTACTTCCAGTAACTACGAGCGTCGTTTTGGTTTTGCCACGTCGATTTTTGTCGCCATTGTCGGTTGGGGAGTGCTGATCTCGTTAGCTTTTACTGGATCGCCTGCTTCTGCTTCTTCGTCTTCTTCTTCCACTACTTCCAGTAACTACGAGGTGAGCAAGGGATTCAATGGCCTCGACAAGGTCATTCTTCGCGATGCTCGTGGAAGCTCTGCCGAGGTGTACTTGTACGGTGGTCAAGTGACTTCTTGGAAGAATGACCAAGCCGAGGAATTGCTTTTTCTCAGCAGCAAGGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCATTATGTTTTCCTCAATTTTCAAACCTTGGTCCTCTTGACTCACATGGATTTGCTAGAAACCGGTTCTGGACCATTGATCACAATCCTCCACCTTTTCCATCAAATACTTTGAGCAAAGCCTTTGTAGATTTGATTCTTAAACCCTCCGAGGACGATATGAAGATTTGGCCTCACAGTTTCGAGTTTCGTCTTAGAGTAGCTCTTGGACCTGGAGGAGAGCTAATGTTGACATCTCGGATCAGGAACACTAACAATGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCAGACATAAGTGAAGTGCGGGTAGAGGGGTTAGAGACATTGGATTATCTTGACAACTTGCAGAAAAGGAAACGCTTTACTGAACAAGGGGATGCTTTGACATTTGAATCAGAAGTTGACAGGATATATCTCAGCACTCCTACAAAGATTGCAATTCTTGATCATGAGAAGAAGAGAACATTTGTATTACGTAAAGATGGTCTTCCTGATTCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGTCTATGTCTGATTTCGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATTACTTTGAAACCTGGCGAGGAATGGAAGGGAAGACTCGAACTTTCAACTGTTCCTTCTAGTTATCGTAGTGGACAGCTTGATCCCCGAAAAGTTATTCATGGAAGCTGA 1125 0.4338 MSTEKIPSAASVSSSSSSTTSSNYERRFGFATSIFVAIVGWGVLISLAFTGSPASASSSSSSTTSSNYEVSKGFNGLDKVILRDARGSSAEVYLYGGQVTSWKNDQAEELLFLSSKAIFKPPKAIRGGIPLCFPQFSNLGPLDSHGFARNRFWTIDHNPPPFPSNTLSKAFVDLILKPSEDDMKIWPHSFEFRLRVALGPGGELMLTSRIRNTNNDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQKRKRFTEQGDALTFESEVDRIYLSTPTKIAILDHEKKRTFVLRKDGLPDSVVWNPWDKKAKSMSDFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSTVPSSYRSGQLDPRKVIHGS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05252 374 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 72 359 - -
Viun3g05252 374 Pfam Aldose 1-epimerase 79 353 IPR008183 GO:0005975|GO:0016853
Viun3g05252 374 SUPERFAMILY Galactose mutarotase-like 73 353 IPR011013 GO:0003824|GO:0005975|GO:0030246
Viun3g05252 374 CDD D-hex-6-P-epi_like 80 354 IPR025532 -
Viun3g05252 374 MobiDBLite consensus disorder prediction 1 23 - -
Viun3g05252 374 Gene3D - 75 361 IPR014718 GO:0030246
Viun3g05252 374 FunFam Glucose-6-phosphate 1-epimerase 75 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05252 Viun-Chr3 59047179 59053728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05252 K01792 - gmx:100801977 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05252 3 59047179 59053728 Viun9g00317 9 2121091 2127278 PCT