Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04989 ATGCTCCGCTTCACATCAAACTCCAATCACTCTTTCTTCTTCCTCTTCTTCTGCATTTTTTTCTTTCTCTTTTCGGCTTCTGCACCAACACCTTCAGATGGCGTTGAAGATGTTGACCAGGAGCGGTACGAGGAGGTGGTGGTGGTGCCGCCATGGACGGCGAGGAGATCAATGGCGGAAGGTGCAAGTTTCAGGAATGTGACTCTGGTGCTTGCTAAGGAGAGAACTCGCCGGCAAGATTGGTTTAACGGTTTTAACCTTTACAACGGTGGCTGGAATATCAGCAACGCCCATTATCTAACGTCAGTTATGTCCACTGCGGGTCCTTTTATCGTTGTGGCTGTAGCCTGGTTCGTGATTTTTGGAGTTGTTTTACTTATCAGCTGTGCGTTATGCTGCTGTTGTAACGGAGGAGAGTCAAGCGACTATTCTAAATTAGTCCATTATTTTTCATTGTTCTTGCTTATCCTCAGCACCATTATCACAATAGGTGGATGCGCTCAGTTGTACACCGGTCAGGGGAAGATTGATGGAAGCACTTCCGAGACACTTGATTACGTTTTGAATCGGGCACAATTGGTGGCTGAAAACCTCAACACCATATCAACTTATTTCGATTCGGCTAAGCACATTGTGAGTGAGCCTCCTCTGCCACTAGACATAGATCTTGGACCGAACCTTGATGACATCAAATTCAAAATCGACCGTGCTGCGGATACTCTTTCCAACAAGGTTACCGCTAACTCAAAGATCATACGCAAAGTCATAGATGGAGTAAGACTCGCTCTCATTATTGTCGCTGTTGTTTTGTTCTTTGTCACATTTCTCCGACTATTCTTTTGCTTACTTGGGTTGCAGTGTCCCGTGTACTCCTTGGTAGTTATTGGATGGATTCTTGTCACTTGTACCTTGGTACTTTGTGCTGCATTTATTTTTGTTCATAATATGGCTGGAGATACATGTGTTGCGATGGATGAATGGGTTGTGAACCCCACCGCCCACACTGCACTGGATGACATTTTTCCATGCGTGGAGGAAAAAGCTGTTATGGAAACATATTTAAAAAGCAAGATGGTCACGTATAAAATCATTGAAGAATTTGACAAAGTCATTTCCAACTTCACGAACGCAAATCAATCAGTCCCTCTTCTCTGCAATCCATTTAATTCAGACCTAACAAGTCGCAACTGCTCTTCAGAGGAAGTCACATTCCAAAACGCCACCCAGGTTTGGAAAAACTTTAAGTGCGAGGTTTCGTTGACCGAAAAATGTAGGAGTGTAGGTCGTTTGACACCGATCCTTTACACGAAACTGGGAGCTGCAGTGAATGTGACGTACGGTTTATTTCAGTATGGGCCATTTTTTGCTGACTTACTTGACTGCAATTTTGTTCGGAAGACGTTCAATGACATTAGCAGAACTTATTGTCCACCTCTGCGAAGATATTGTGAACAGGTTTATTTGGGATCAGTTTTGGTTTCTGCAGCAGTAATGCTCTCTTTGGTATCTTCGCTCTTCTTTGTCAGAGAGCAGTTCATGTTTCTTCACAACAACCGTGTTTTTTAG 1566 0.4368 MLRFTSNSNHSFFFLFFCIFFFLFSASAPTPSDGVEDVDQERYEEVVVVPPWTARRSMAEGASFRNVTLVLAKERTRRQDWFNGFNLYNGGWNISNAHYLTSVMSTAGPFIVVAVAWFVIFGVVLLISCALCCCCNGGESSDYSKLVHYFSLFLLILSTIITIGGCAQLYTGQGKIDGSTSETLDYVLNRAQLVAENLNTISTYFDSAKHIVSEPPLPLDIDLGPNLDDIKFKIDRAADTLSNKVTANSKIIRKVIDGVRLALIIVAVVLFFVTFLRLFFCLLGLQCPVYSLVVIGWILVTCTLVLCAAFIFVHNMAGDTCVAMDEWVVNPTAHTALDDIFPCVEEKAVMETYLKSKMVTYKIIEEFDKVISNFTNANQSVPLLCNPFNSDLTSRNCSSEEVTFQNATQVWKNFKCEVSLTEKCRSVGRLTPILYTKLGAAVNVTYGLFQYGPFFADLLDCNFVRKTFNDISRTYCPPLRRYCEQVYLGSVLVSAAVMLSLVSSLFFVREQFMFLHNNRVF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04989 521 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 55 506 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04989 Viun-Chr3 56808084 56811299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04989 - - vra:106766478 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04989 3 56808084 56811299 Viun10g02780 10 40711104 40715525 ECH
Viun3g04989 3 56808084 56811299 Viun3g04989 3 56808084 56811299 ECH