Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04746 ATGGCGAAACCTCGCAAGACCAAGAACAACGAAGACCCCAAGCCCGAGAACTCTGGTGCCCTAGTTCACCACCAGAAGATATGCCTCTCAATCGACATCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGGTTGCACGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTCGATGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGAAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCTCTCTGGAGAAGGAGCTGGTGCCCAATTTACTTATTAACTGCTGTAAACCTTCCAAGACTGAAAGTGAACAACAGCAGGAGCAACTAGTTCCGGAGAACGGGTTTCACTCCACGGCCGAGCCCAAACAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACAGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCTAGATGTTGGTTCCCCTGTATAGATGACAATTCACAACGATGCTGTTATGACCTGGAGTTCACCGTAGCACACAATCTTGTGGCTGTTAGTACGGGATTCTTGCTTTATCAGGTGTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTAGCTGCAAGATGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACACATGTGTTTGATGCCTAATCTGTCAAAGATGCGGAATACAGTGGAATTTTTCCACACTGCCTTCAGCTGCTATAAGGATTATCTTGCTGTAGACTTTCCATTTGACTCATACACGCAAGTTTTCATAGAGCCAGAGACGGCTGTGTCTGCATTAAGTTTAGGAGCCTCTATGAGTATATTTAGTTCACAAGTTATGTTTGATGAGAAGGTTATTGATCAGACTATTGATACTAGGGTAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGGGTGTATATCACTCCTGAGACACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGCTTCTTGACAGATTTTTATATCAAGAAACATTTGGGAAATAATGAGGCACGATACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTCTGAGCTGTTCAGCTTCCTGCAAGGATTTATATGGAACTCAGTGTATTGGTTTGTATGGAAAAATAAGATCGTGGAAGTCTGTGGCCGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTGCAAACGATTGTTTCTCGGGCTCAAGATAAAACACGTTCCATGAAGACTCTAAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGTCCATTTCTTAAGGATTTCTTTCCACGGTGGGTTGGTTCTTGTGGATGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGAGGATGTACAGCATTGCAGACTTCAACTACATCCACTCTTGATATTAATCCAGAGACAGAAAATAGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCTATTCTGCCAATGGCTGGAGAAGCATGGCAACTATTGGAAATACAATGCCACTCAAAGCTTGCAGCTAGACGCTTTCAGAAGCCCAAGAAAGGGTTAAAACATGATGGATCTGATGATAATGGTGACGTGCCTTCCATGGATGTGCGCTCAAATACTGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCCGAGGTTCATTTTAACCAACCTGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAACTATCATTTTCTATTGTAAATGCCCTAAACAATTTTCTTAGTGACTCCAAGGCTTTCTGGAGAGTACGGATTGAAGCGGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTATAAGAGTCGAAGGTTTGATCCTGACATTGGACTCCCAAAGCCGAATGATTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCCATGGTTAGAGCCGCTGACAAGAAAAGCCCAAGAGAGGCTATTGAGTTTGTTCTACAGCTATTGAAGTACAATGACAACAATGGGAATCCCTACTCAGATGTCTTTTGGCTTTCTGCATTAGTCCAATCGGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTGTTGTTGTCATCACTTCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAAGATATAATGGAATCTTGACTATCAGTTGTATCCGAACATTGACCCAGATCGCGTTGAAGCTTTCGGAGTTCATTCCTCTTGAACGAGTTTATGAACTTGTAAAGCCTTTTCGTGACTTGAAGACATTGTGGCAAGTTCGAATTGAAGCAAGCAGAGCACTCCTTGACCTTGAATTCCACTGCAAGGGCATGGATTCAGCATTGCTTTTATTCATCAAGTACTTAGAGGAGGAGCATTCCTTAAGAGGACAGTTAAAGCTAGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAGATGAGGAAATTACCAGCCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCTTTTAATAATGTCTTTCTCCGGCATTATTTGTTCTGCATACTACAAATACTTGCAAGAAGACCACCAACTCTTCATGGGATTCCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATGTTTGTTCTTGATTCGGATAGCAAACCTTTGGATCTGCCAAGCTCTACTCAAAACCCTACACCAAATCTTGGCCTGGATGGTTTGAGGGATGCACTTTACGAAGCTTCTAAGGACCCACCTGATGAAGCTCCGACACAGGTGCACATTGAAGCTCTAAAGGAAGCACCCCTAGAGAAAGCCGAAGAAGTATATACTGAATTTCCACAGGAAGCACCAATGGAAGCTCCAAATGAAGTTTCCAAGGAAGCTGATACAGTATCCAATAGCCATGAAAGAAAGAGGCTCATCAAAATCAAGGTCAAACAATCTTCTGCTACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCCCAGAGGAATTTTGCCGAGACTCTTAGCATGAGTAATCACAATATAGACGAAGTTAATTCATGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCTAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTTCAGTGCACTGCTGATTCAAGTATAGTTTATTCGCAACCTCAGCCAGAAGATCCGTCATCATCTAGTATTATACAGGATAACAATGTGGATGCTGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGACGGAGAATCATTAGGTAAAGAAATTCCTGCTCGTGGCAAGGAAAAGCACAAGAGCAAGGAAAAGAAACGAAAACGTGAAAGTAGTAAAGGACACCATGATGATCCAGAATATTTGGAGCGAAAACGACTAAAGAAGGAGAAGAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAGTGATGAAGCAAAGAGATCCTCTGTAGAGTTGTCAAGTAAGAAAGAGGAACCTGTAGTGGACGTCACTAGACAGATTAAATCTGTTGAGCCCAGCGGTGGATATAATTCTAAATTAGAAACCAAAAAGATTGATAGCAAACCGGATCCATCTGAAGGCACGTCTGGCGCACCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTCATAG 4155 0.426 MAKPRKTKNNEDPKPENSGALVHHQKICLSIDIDKRLVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQQQQVEDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNLLINCCKPSKTESEQQQEQLVPENGFHSTAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHTAFSCYKDYLAVDFPFDSYTQVFIEPETAVSALSLGASMSIFSSQVMFDEKVIDQTIDTRVKLAYALARQWFGVYITPETPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSTLDINPETENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPRYNGILTISCIRTLTQIALKLSEFIPLERVYELVKPFRDLKTLWQVRIEASRALLDLEFHCKGMDSALLLFIKYLEEEHSLRGQLKLATHVMRLCQMRDGLNSDEEITSQTLVSMLNLLEGRTAFNNVFLRHYLFCILQILARRPPTLHGIPRENRTLHMSLTEACNYQKNMFVLDSDSKPLDLPSSTQNPTPNLGLDGLRDALYEASKDPPDEAPTQVHIEALKEAPLEKAEEVYTEFPQEAPMEAPNEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETLSMSNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEIPARGKEKHKSKEKKRKRESSKGHHDDPEYLERKRLKKEKKRREKEMAKLQSDEAKRSSVELSSKKEEPVVDVTRQIKSVEPSGGYNSKLETKKIDSKPDPSEGTSGAPKIRIKIKNRMLNKS 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1211 1232 - -
Viun3g04746 1384 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 254 IPR042097 -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1246 1384 - -
Viun3g04746 1384 Gene3D Neutral Protease Domain 2 264 512 IPR027268 -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1304 1335 - -
Viun3g04746 1384 Coils Coil 1292 1319 - -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 608 630 - -
Viun3g04746 1384 Gene3D tricorn interacting facor f3 domain 20 253 IPR042097 -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1281 1296 - -
Viun3g04746 1384 FunFam Transcription initiation factor TFIID subunit 261 512 - -
Viun3g04746 1384 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1303 IPR037813 GO:0005669
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1254 1268 - -
Viun3g04746 1384 FunFam Transcription initiation factor TFIID subunit 2 110 253 - -
Viun3g04746 1384 Pfam Peptidase family M1 domain 284 481 IPR014782 GO:0008237|GO:0008270
Viun3g04746 1384 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 275 517 - -
Viun3g04746 1384 CDD M1_like_TAF2 24 508 - -
Viun3g04746 1384 SUPERFAMILY ARM repeat 455 987 IPR016024 -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1085 1155 - -
Viun3g04746 1384 MobiDBLite consensus disorder prediction 1117 1135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04746 K03128 - gmx:100792795 2468.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04746 3 54871290 54892504 Viun3g04746 3 54871290 54892504 ECH