Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04730 ATGCTACAAAGAGTAGTGCGATACTCCGTCCAACCATTTAATCTTCCAACTCGCACGACACCACCATCACTTACGCCAATTCAATTAATACCCACTTCTCCATCTTTCCCAATCCTCAAACAGCAATGCAGATTATCACGTAGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTACTTCTCTTGGGTACTCAGGCAGTGGATGGATCCAGCGCAAAAGCAGAAGCAGCAGATGCAAACACAAACGAAAGTGATCAACCAGAAGAGAATGTGGTTTTTGTAGAAGAGGATGTTGCTAACACAAGCAGCACTGCTCAACCAGAAGAGAATCGTGTTTTAGCAGAAGATGTTGCTAACACAAGTAACACTGCTCAACCAGAAGCGAATCCTGTTTTAGCAGAAGATGTTGCTAACCAGCAGGCAGAAAATTTAAATGTAGCAGAAGGAAATGTTACTAAAACAAGCAACAGAGACCAACCAGAAGAGAATCTGACTACCACTCCTAGCTGCACCGAAAGAAAAACTACCAAACAAGTATTTTTAGACATATCTATTGATGGCGAACCTGCTGGGCGCATTACCGTAGGGCTTTATGGAGATGAGGTCCCTGCAGGAGTCGACAGGTTTAGTAAGATTGTGAGTGGAGCCGCTGGTATTAGCTACAGAAGAAAAGAGTTTGTCAAAATCATGCCCAATTATGTTCAACATGGCGGCCTTAGATCCTATGGGGTGGATTCTGAATTTGCTTCGAGGACAGGTAGCAACTTGGGAGCTGATAGTCTAGTTCAGGAATGGGAGAGGGAGTATGAAAAATGTCCTGGGACTAAAAACGTGACTGGAAGTGTTGGCATTATTGTGAGAAACCCGTCAAAACCACCCCCAAAGATGAAGCTGGTTGCCAAGAAAGGAAAGCTTGAGATTGATCAAGAAGAAGTAGGTATTGATCCCAATGGTACAGAATTTGTCATAGTTACAAAGGACTCACCAGAATTGGATACATCTTCTCTGGTAATTGGAAGAGTGATAGGAGGCATGGAGGTTGTCAAGAGGATCGGTGAGGTTAAAACGGTACAGGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTGATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGTGGTTTAATGCAGTAA 1203 0.4347 MLQRVVRYSVQPFNLPTRTTPPSLTPIQLIPTSPSFPILKQQCRLSRRELTIFSNSCLLLLLGTQAVDGSSAKAEAADANTNESDQPEENVVFVEEDVANTSSTAQPEENRVLAEDVANTSNTAQPEANPVLAEDVANQQAENLNVAEGNVTKTSNRDQPEENLTTTPSCTERKTTKQVFLDISIDGEPAGRITVGLYGDEVPAGVDRFSKIVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDSEFASRTGSNLGADSLVQEWEREYEKCPGTKNVTGSVGIIVRNPSKPPPKMKLVAKKGKLEIDQEEVGIDPNGTEFVIVTKDSPELDTSSLVIGRVIGGMEVVKRIGEVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLMQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04730 400 SUPERFAMILY Cyclophilin-like 174 399 IPR029000 -
Viun3g04730 400 FunFam Peptidyl-prolyl cis-trans isomerase B 169 400 - -
Viun3g04730 400 MobiDBLite consensus disorder prediction 143 168 - -
Viun3g04730 400 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 181 359 IPR002130 GO:0000413|GO:0003755
Viun3g04730 400 Gene3D - 167 400 IPR029000 -
Viun3g04730 400 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 14 400 IPR044185 -
Viun3g04730 400 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 180 398 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04730 Viun-Chr3 54756345 54758180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04730 K03768 - gmx:100800469 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04730 3 54756345 54758180 Viun3g04730 3 54756345 54758180 ECH