Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04721 ATGCCGGAATTGGAAGGTCGTTTTTTGGGGACTACTTCACAGTTTGATACATTTGGTTTTACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGACGGAACAGAAACAGAGACCATCCGTAATACCTGGACCTGCTCCTGATGAAATAGTTGTTCCGGCCAATGAGTCTATAGGGGTAAAACTGCTCTTAAAGATGGGGTGGAGTCGTGGCCGCACCATCAAGGATTCACATTCTGATGCATTGTATGATGCCAGAAGACAGGCACGCAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGAAGGTATCAGAGTCTGAGTCTGTCCAGGGTGATATTGAAAATTTTCCTGAGGAGCCTGTGAATGACGATGCTCAGATTTCTAAGAGCACACCGGTTTATGTACTCAACCCAAAGCAAGATCTTCATGGATTAGGTTTTGATCCTTACAAGCATGCTCCGGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAACAAGGGGGGACTTGGGTTCTCGAGAGATAGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCCGGTTTTGGCATTGGAGCTCTGGAGGAGCTTGATGCTGAGGATGAGGATGTCTATGCCACTGGTTACGAATTTGAAGATGCTTATGTTCAAGAAGTAGAAGAACCTTCAACATTGAGATTAGAAAATCCGACAAAGAAAGAGCCGAAGGACCAGGGTGATCTGCCTGGTTTCAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATTCCTAAGGATTTTGTGCCCCACCACAAATTTTCTGGACCACTTGACCTTAACCGCAAGAGCTATGAAGTTACTCCACCGGACACTCCTCCTCCAGAGGATGGCAATTTAAAATTATTAATTGAAGGGGTTGCTAATCTGGTAGCTAAATGTGGAAAATTATATGAGGATTTATCTAGAGAAAAGAATCAATCAAATCCACTGTTTAGTTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCTAGGAAATTGTGGGAGGCACAGCAGAAACACAATGATCAGACTAGTCAGCAGTTGGATGGAAAAATGACTCCTGGTTTGAATAAGCTAACAGCTGAGAGCCGAGGCCAGATCTTAGGGGAAAAACCTTTAGAAAAAAGCTCCCAAGGTCCATCCTCATTTGTTGCGTCGACAGATATTCAACTCCAATTTAATCTTACTGATACATTTACCAAGTCTACATCAGTTAGTGAGTTGATGAATGTAGAAAAGCCTTTCAAAGATGATCCAGCAAAGCAAGAAAGATTTGAGCAGTTCCTTAAGGAGAAATATAAAGGGGGATTGCGCTCTGCAAGTTCTAGTTTAGCTAGTGATATGTCGGAGGCTGCTCGTGCTCAAGAAAGACTGAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGGACGACAGGGCAGGGGAAGCAAGCCTTTAACTCCATCTGCCATGGATTTCATCCCAGGTGGTGTCAAGCAGTTTACTTCTGGTGAATTAGAGCCAAAAACAAACCTGCAAGCTGATGATATTTTGAGGAAAAAAACGTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTCTGTGCAAACGCTTTGATTTGATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGGATTAGAAGTAAAATGGATTCCTTGATTTTTACATCAGATTCAGTCAAAGGTATCAAAATGGACGACCCTGTTACATCAAAGAAAGAAATCTCACCTTTGCAACAATATACTACTGAAGACATAACCAAAAATATCACTGAAAATGAACCTGAAGGGGACGTGGAAGTTGAAAATATTGAAAGGCCAGTTGACTTGTATAAGGCTATTTTCTCCGATGATTCAGATGATGAAGGGGGAGATTCTGGTATTGGGAGAGTGGATAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCTTTGAGCCGATTGATTGCAGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGTATTGAGGTTCCTCCTGATATGCCTTACCCCACACAGAAGTCCAAGAACATTGCACCTCAGAAAGAACTTGTTAATGAAGATACAAGAATTGAAACCCTCGACAGTCAAAATAATGAAGAGATATCTTTAAATCATGATTTGCGATATGGTCAGCATATTGCTCATGAGGGTGGTCTATCAAAAGGTGGCACTATTCATGGAAATAACCGTGAGAACAGTAATGTGAAAACCAAGGGAGCCAGTACCATGAGCTATAAACCCGGCAACCATGACTATAGCAGCAGTTCAGAAGAAGAAAAAGGCAGAAAGCGATCTAGTAGGGAAAAATATGATGAGCACAGGAAGCTTAAAACCCCTGTAACACACCGCCGAGATTATAGTAGCAGTTCTTCATTAGAAGAGGAAAAGAGCAGAAAACGTTCTAGACATCATCGACATAAGAGGCGTGATGCAGGAAGTGATTCATCCAGTGATGACGAAAGAAGAGATAGACACAGTTCAAGGTCAAAAGAAAAGAAAGGTTCCTCCCGAGAAAAAAGCAGAAGTGAAAAACACTCAAAACACCGCAAACACAGAAAGCATGAATCTCCAGATAGACACTCTCGTTATAGCAATGAGAAGGACAATTCACGTTCCAGAAGTGAGAAAAAGCGGAGGGAATGA 2703 0.4229 MPELEGRFLGTTSQFDTFGFTAAEIARKQAETEQKQRPSVIPGPAPDEIVVPANESIGVKLLLKMGWSRGRTIKDSHSDALYDARRQARRAFLAFSSDDPKVKVSESESVQGDIENFPEEPVNDDAQISKSTPVYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLANKGGLGFSRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPSTLRLENPTKKEPKDQGDLPGFRVASNSDYKMERFEAPLIPKDFVPHHKFSGPLDLNRKSYEVTPPDTPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFSFLSGGTGHEYYARKLWEAQQKHNDQTSQQLDGKMTPGLNKLTAESRGQILGEKPLEKSSQGPSSFVASTDIQLQFNLTDTFTKSTSVSELMNVEKPFKDDPAKQERFEQFLKEKYKGGLRSASSSLASDMSEAARAQERLSFEAAAEAIEKGRQGRGSKPLTPSAMDFIPGGVKQFTSGELEPKTNLQADDILRKKTYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDSLIFTSDSVKGIKMDDPVTSKKEISPLQQYTTEDITKNITENEPEGDVEVENIERPVDLYKAIFSDDSDDEGGDSGIGRVDNQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYPTQKSKNIAPQKELVNEDTRIETLDSQNNEEISLNHDLRYGQHIAHEGGLSKGGTIHGNNRENSNVKTKGASTMSYKPGNHDYSSSSEEEKGRKRSSREKYDEHRKLKTPVTHRRDYSSSSSLEEEKSRKRSRHHRHKRRDAGSDSSSDDERRDRHSSRSKEKKGSSREKSRSEKHSKHRKHRKHESPDRHSRYSNEKDNSRSRSEKKRRE 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04721 900 Gene3D Surp module 275 357 IPR035967 GO:0003723|GO:0006396
Viun3g04721 900 MobiDBLite consensus disorder prediction 634 654 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 745 771 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 220 245 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 878 900 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 830 861 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 226 241 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 734 900 - -
Viun3g04721 900 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 3 898 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 862 877 - -
Viun3g04721 900 Pfam Surp module 302 349 IPR000061 GO:0003723|GO:0006396
Viun3g04721 900 MobiDBLite consensus disorder prediction 683 704 - -
Viun3g04721 900 SMART surpneu2 300 352 IPR000061 GO:0003723|GO:0006396
Viun3g04721 900 ProSiteProfiles SURP motif repeat profile. 302 346 IPR000061 GO:0003723|GO:0006396
Viun3g04721 900 MobiDBLite consensus disorder prediction 28 47 - -
Viun3g04721 900 MobiDBLite consensus disorder prediction 772 818 - -
Viun3g04721 900 FunFam G patch domain-containing protein TGH 266 356 - -
Viun3g04721 900 SUPERFAMILY Surp module (SWAP domain) 281 352 IPR035967 GO:0003723|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04721 Viun-Chr3 54592024 54601501 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04721 K13123 - gmx:100796934 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04721 3 54592024 54601501 Viun3g04721 3 54592024 54601501 ECH