Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04679 ATGCAGAATTTAGTTCGCAGAGTGGTGAAACACCACCCCCATGGTCACCCCAAATGTCACAGTATCTTCAACACCTTTTCCTCTGTTCTTAAACCTTCACAACCCCAACTTCATCAACGCATCCACATTCCCTCTTCCTTCCTCACTCACCAATCTATTCACTTTCACTCATGTCGCTCCTTTTCCACCAAACTCCGCCCCTTTCTCTCCCGACCAACCACCTCGCGTTGCTTCGCCTTCAACTCTCTCCTCGGACTCCGCGCTAGAAGCCTCTCGCTAGATCACAGGCCAATTCTTCATTATTTTCGTCGACACAACTTCAATTTCAACTACAATAATGAATTCTCCTGGCGTTCCTGGAGATCATGGCTCCGTGGACTAACATCTAATGACGTGGTTTTGGGATTGATTATAGCTAATGTTGGTATTTTTTTATTGTGGAGGATAGCGGATGAGAAGTTTATGATAAAAAATTTTACCATCTCTTTGGACAATATTAAGAGTGGACGTTTGCACACTTTGATTACCAATGCATTTAGTCACGTAGATACCTGGCATATAATTTCCAATATGATTGGACTCTACTTCTTTGGAATGAATGTTGGAAGAAATTTTGGACCCGAATTTCTGCTGAAGCTGTATCTTGCAGGGGCAATTGTTGGCGCTGGTTTTTACTTAATGCATCAGGCCTTTAAAGCGCAAACATCAAAGGACTGGAAAGCTATGATTGTGTCAAGGGAATTAGCATTGGGGGCAAGTGGAGCTGTGAATGCTGTTATGCTACTTGACATATTTCTCTTTCCAAAAGCAACAATCTACCTTGACTTCTTTATACCAGTTCCTGCGATCTTGCTGGGCATCTTTTTTATTGGGAAAGATATGCTCAGGATACTAGAGGGAGACAGTAAAGTAGCTGGATCTGTTCATTTGGGGGGTGCTGTCGTTGCAGCCATAGCTTGGGCTGGTGTTCGGAGAGGAAGATTCTAA 987 0.4336 MQNLVRRVVKHHPHGHPKCHSIFNTFSSVLKPSQPQLHQRIHIPSSFLTHQSIHFHSCRSFSTKLRPFLSRPTTSRCFAFNSLLGLRARSLSLDHRPILHYFRRHNFNFNYNNEFSWRSWRSWLRGLTSNDVVLGLIIANVGIFLLWRIADEKFMIKNFTISLDNIKSGRLHTLITNAFSHVDTWHIISNMIGLYFFGMNVGRNFGPEFLLKLYLAGAIVGAGFYLMHQAFKAQTSKDWKAMIVSRELALGASGAVNAVMLLDIFLFPKATIYLDFFIPVPAILLGIFFIGKDMLRILEGDSKVAGSVHLGGAVVAAIAWAGVRRGRF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04679 328 FunFam RHOMBOID-like protein 12, mitochondrial 126 327 - -
Viun3g04679 328 SUPERFAMILY Rhomboid-like 132 325 IPR035952 -
Viun3g04679 328 Pfam Rhomboid family 166 323 IPR022764 GO:0004252|GO:0016020
Viun3g04679 328 Gene3D - 129 321 IPR035952 -
Viun3g04679 328 PANTHER RHOMBOID PROTEASE 11 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04679 Viun-Chr3 54157534 54166084 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04679 - - vra:106767388 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04679 3 54157534 54166084 Viun3g04679 3 54157534 54166084 ECH