Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04649 ATGGAGAACGAGAGTAAGAAGGGCAAAGAAAGCAGTGCGAGCGGTCAACGTCGTGTGGGTTTACTATACGATGGGAGGATGGGCAAACACTACGCGCCGAACGAGACGAACCACGTCGAGAATCCTAATCGCATTAGGTCAATTTGGAACAGACTCGAAAGTGCCGGCGTTCCTCAACGATGCGTGCTTCTAGAGGCCAAGAAAGCTGAAGACAGACATGTTCAGTTAGTGCATTCCCACCATCATGTAAATCTTATTAAAAACATTAGCTCCAAGGCATTCAAATCGCGGAGGTCTCAGATTGCTTCCAAATTGAACTCCATATATTTTAATGAAGGTTCATCTGAAGCTGCGTTCCTTGCTGTTGGCTCTGCCATAGAGGTTGTTGAAAAGGTGGCAAGTGGGGAATTGGATTCAGCTGTTGCCATTGTGAGGCCCCCAGGTCATCATGCAGAACATAATGAAGCTATGGGATTTTGTCTCTTCAATAATGTGGCGGTTGCTGCAAGATATCTCTTAGAGGAAAGACCTGATTTAGGTGTGAAGAAAATATTAATTGTTGATTGGGATGTCCATCACGGAAATGGTACTCAAAAAATGTTCTGGAATGACTCTCAAGTTTTATTCTTTTCCGTTCACAGGCATGAGTTTGGGACTTTTTATCCTGCTAATCACGACGGATTTTATACTAAGGTCGGAGAAGAAGAAGGTGCAGGATATAATATAAATGTCCCCTGGGAGAATGGGAAATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCCAAAGAATTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTTGGAGGATGTCGTGTCACAGCAGCTGGTTATTCTGTTCTGTTGGAGAAGTTGATGAATTTTGCTGAAGGTAGGATTGTACTGATTTTAGAAGGGGGATATAATCTTGATTCCATTGCAAAATCAATGCATGCTTGCTTGGAAGTTTTGCTAACTGGCAAGTCTGTTACCGAATCCTTAAAGGCCTATCCATTTCAGTCTACATGGCATGTGATTCAAGCGGTTCGCGAGATGTTAAGTCCATTTTGGCCTACACTTGCATCTAAACTACCACCAGAGTTAGTCTCACAAATAGGCCCCCCTCCGCATACTCTAATTTCAAGTTCGGACTCTGAAGATGAGGATGATAAGGGTGTACGAAGTTCAGAAAATCATGGAGAACTTATTGAGGATATCTTGAAACCACTTTCCAATCTGAAAGTTGATGCTGATGAGGAGATTCATGTTTCTAGTACTTGGCGATCGGCATTGTCAAATGTTTATATATGGTATGCCTCGTATGGATCAAATATGTGGAAAACAAGATTTAATTGCTACCTAGAAGGTGGACAGGTGGATGGTATGGTGAAGCAGTGTTCTGGTTCAGTTGACAGAACTTTGCCAAAGGAGATCATGCGGAAGACTTTCCCTTGTGATATATTCTTTGGTCGTGATTCGTCGCATTCATGGGGACTGGGAGGCGTTGCATTTCTTAATCCTGAAAAAAAGTTTGAAGGCAAGACCTACATGTGCTTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAGAACATTTTAAGCCTTGATGCGGCCTCTCCTTTATTTGATATAACTACCTTGAATGCTATCTCTGACAAGGAGTTCAACTCCCTGGAGGTTGTCAAGGATGCTTGGTATGGCAATGTTGTCTACTTAGGAAAGGAGCAGGATATTCCTGTGATTACCATGACGTCTTCGTTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTACCATTACATGCCCCTAATAAGGCGTATGCCAACTCCTTAATTAAAGGGTTGGTAGAGGGAGAACAACTTTCGGAGCAGGAAGCCATTGCTTATATAGAAGGTGCTGCTAAATCGTTATAA 1971 0.4242 MENESKKGKESSASGQRRVGLLYDGRMGKHYAPNETNHVENPNRIRSIWNRLESAGVPQRCVLLEAKKAEDRHVQLVHSHHHVNLIKNISSKAFKSRRSQIASKLNSIYFNEGSSEAAFLAVGSAIEVVEKVASGELDSAVAIVRPPGHHAEHNEAMGFCLFNNVAVAARYLLEERPDLGVKKILIVDWDVHHGNGTQKMFWNDSQVLFFSVHRHEFGTFYPANHDGFYTKVGEEEGAGYNINVPWENGKCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTAAGYSVLLEKLMNFAEGRIVLILEGGYNLDSIAKSMHACLEVLLTGKSVTESLKAYPFQSTWHVIQAVREMLSPFWPTLASKLPPELVSQIGPPPHTLISSSDSEDEDDKGVRSSENHGELIEDILKPLSNLKVDADEEIHVSSTWRSALSNVYIWYASYGSNMWKTRFNCYLEGGQVDGMVKQCSGSVDRTLPKEIMRKTFPCDIFFGRDSSHSWGLGGVAFLNPEKKFEGKTYMCLYKISLEQFNDILFQENILSLDAASPLFDITTLNAISDKEFNSLEVVKDAWYGNVVYLGKEQDIPVITMTSSFLDIERFKSGKLPLHAPNKAYANSLIKGLVEGEQLSEQEAIAYIEGAAKSL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04649 656 Pfam Histone deacetylase domain 38 338 IPR023801 -
Viun3g04649 656 MobiDBLite consensus disorder prediction 384 413 - -
Viun3g04649 656 PANTHER HISTONE DEACETYLASE 9-RELATED 13 392 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Viun3g04649 656 Gene3D - 443 654 - -
Viun3g04649 656 Gene3D Histone deacetylase domain 12 386 IPR037138 -
Viun3g04649 656 SUPERFAMILY Arginase/deacetylase 17 374 IPR023696 -
Viun3g04649 656 MobiDBLite consensus disorder prediction 397 413 - -
Viun3g04649 656 PRINTS Histone deacetylase superfamily signature 146 169 IPR000286 -
Viun3g04649 656 PRINTS Histone deacetylase superfamily signature 273 283 IPR000286 -
Viun3g04649 656 FunFam Histone deacetylase 15 12 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04649 Viun-Chr3 53987817 53993032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04649 K11406 - gmx:100788831 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04649 3 53987817 53993032 Viun3g04649 3 53987817 53993032 ECH