Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04648 ATGGCTGCTCTAGCTCTTGCACTGCTTCTTTTGGCTTTCACTGGCACTTCAAGTGCAACTTGGTGCGTTTGTAAGGATGGAGGCGACGCGATCCTGCAGAAAACATTAGACTATGCTTGTGGAGCTGGTGCTGACTGTAACCCTCTCCATCAAAATGGGCCTTGTTTCCAGCCCAACACCGTCAGGGCCCACTGCAACTACGCCGTCAATAGCTACTTCCAGAAGAAGGGTCAAGCTCAAGGGTCCTGTGAGTTTGCAGGAACAGCCACTGTTACTGCAACTGACCCTAGCACTGGTGGTTGTGTCTACCCTTCAAGTGTCAGTGCTGCAGGCACTGGTACAACTCCCGTGACAACTACACCAACCATGGGCACCACTCCCACCACTGGAACCCCATCAACCGGTACCGGCACCGGCACCGGAACCACCACTGGTACTACTCCATACAGCACCACACCTGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGAGAGTCACGGTGGTGTTAGACTAGTGCACTCTGGTTTCTTCTTGATCACTCTCTTCTCTTCCTTCATGATCTTCTGCTGGGGCTGA 603 0.529 MAALALALLLLAFTGTSSATWCVCKDGGDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTATDPSTGGCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGVRLVHSGFFLITLFSSFMIFCWG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04648 200 SMART X8_cls 20 103 IPR012946 -
Viun3g04648 200 FunFam Glucan endo-1,3-beta-glucosidase 4 15 107 - -
Viun3g04648 200 Pfam X8 domain 20 90 IPR012946 -
Viun3g04648 200 MobiDBLite consensus disorder prediction 111 155 - -
Viun3g04648 200 Gene3D - 15 110 - -
Viun3g04648 200 PANTHER BETA-1,3 GLUCANASE 8 124 IPR044788 -
Viun3g04648 200 MobiDBLite consensus disorder prediction 111 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04648 Viun-Chr3 53973197 53976518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04648 16 133 Glycoside Hydrolase AT1G66250 39.167 3.54e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04648 - - gmx:100500078 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04648 3 53973197 53976518 Viun3g04648 3 53973197 53976518 ECH