Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04638 ATGGTGAAGATATGTGGCATTGGAGCTGGGTACGTGGGGGGTCCTACAATGGCTGTGATTGCTCTGAAATGTCCCTCAATTGAAGTGGCTGTGGTTGACATCTCCGAGTCTCGCATATCAGCTTGGAATAGCAACAAACTCCCAATTTATGAGCCTGGCCTTGAAGAAGTGGTGAATCAGTGTAGAGGAAAGAACCTCCTCTTCAGCACCGATGTGGAAAAGCACGTTCATGAGGCAGACATAATCTTTGTTTCAGTGAACACTCCCACAAAAATCAAAGGACTTGGAGCTGGTAAGGCTGCAGACTTAACCTATTGGGAAAGTGCAGCTAGGATGATTGCTCATGTTTCCAACTCTGATAAGATTGTTATTGAGAAATCCACTGTCCCAGTCAGAACAGCTGAGGCAATTGGGAAAATTCTAACTCACAACACTAAAACCAAGGGCATCAACTACCAAATTCTGTCAAATCCTGAGTTTCTCTCTGAGGGAACAGCTATTCAGGACCTTCTAAACCCCGACCGGGTTCTCATTGGAGGGAACCAAGACCCTCAAGGTTTAGATGCAATCCAAAAGTTGAAGGCCATATACACTCATTGGGTGCCTCAAGACAGAATCATAACAACCAATTTGTGGTCAGCAGAACTCTCCAAGTTAGCTGATAATGCCTTCTTGGCTCAAAGGATTTCATCTATCAATGCAATGTCTGCTTTATGTGAAGCCACTGGGGCTGAAGTCTCACAAGTTTCTCTTGCTCTCAGCAAAAACACCAAAATTGGGCCAAAGTTCCTCAATGCCAGTGTTGGTTTTGGTGGTTCTTGCTTTCAAAAGGACATACTCAACTTGGTGTACATATGTGAGAGCAATGGCCTCACTGAAGTGGCAAATTATTGGAGAGAAGTGATCAAGGTGAATGAGTACCAGAAGAGTAGGTTTGTGCACAGGGTTGTGACCTCAATGTTCAACACGGTTTCTGGTAAGAAGATTGCAATTCTGGGATTTGCCTTCAAGAAGGACACCGGTGACACAAGGAAAACTCCTGCTATTGATGTTTGCAAAGGCCTTTTGGGAGATGATGCTTGCTTGAGCATCTATGATCCACGCGTTACTCAGAATCAGATTGAAAAGGACTTGTCAATGAGTTGCAGTGGTGTGAAACATGTTAATGTTGTTGGAGATGCTTATGAGGCAACTAGAGATGCTCATGGAGTATGCATTCTTACAGAGTGGGATGAGTTCAAGACAATTGACTATGAAAGAGTGTACGAGAACATGGTTAAACCAGCATTCGTGTTTGATGGTAGAAACATGTTGGATGTTGACAAGTTAAGGAAAATTGGATTCATTGTTTACTCAATTGGGAAGCCTTTAGACCAATGTGGCTGA 1386 0.4351 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISESRISAWNSNKLPIYEPGLEEVVNQCRGKNLLFSTDVEKHVHEADIIFVSVNTPTKIKGLGAGKAADLTYWESAARMIAHVSNSDKIVIEKSTVPVRTAEAIGKILTHNTKTKGINYQILSNPEFLSEGTAIQDLLNPDRVLIGGNQDPQGLDAIQKLKAIYTHWVPQDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSLALSKNTKIGPKFLNASVGFGGSCFQKDILNLVYICESNGLTEVANYWREVIKVNEYQKSRFVHRVVTSMFNTVSGKKIAILGFAFKKDTGDTRKTPAIDVCKGLLGDDACLSIYDPRVTQNQIEKDLSMSCSGVKHVNVVGDAYEATRDAHGVCILTEWDEFKTIDYERVYENMVKPAFVFDGRNMLDVDKLRKIGFIVYSIGKPLDQCG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04638 461 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 439 IPR014027 GO:0016616|GO:0051287
Viun3g04638 461 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 306 IPR014026 GO:0016616|GO:0051287
Viun3g04638 461 FunFam UDP-glucose 6-dehydrogenase 243 459 - -
Viun3g04638 461 SMART UDPG_MGDP_dh_C_a_2_a 330 440 IPR014027 GO:0016616|GO:0051287
Viun3g04638 461 NCBIfam nucleotide sugar dehydrogenase 3 436 IPR017476 GO:0016616
Viun3g04638 461 PIRSF UDPglc_GDPman_dh 2 455 IPR017476 GO:0016616
Viun3g04638 461 Gene3D - 211 242 - -
Viun3g04638 461 Gene3D - 243 460 - -
Viun3g04638 461 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 317 451 IPR036220 -
Viun3g04638 461 Gene3D - 1 210 - -
Viun3g04638 461 FunFam UDP-glucose 6-dehydrogenase 1 210 - -
Viun3g04638 461 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 457 IPR028356 GO:0003979
Viun3g04638 461 PIRSF UDPglc_DH_euk 1 461 IPR028356 GO:0003979
Viun3g04638 461 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 212 311 IPR008927 -
Viun3g04638 461 FunFam UDP-glucose 6-dehydrogenase 211 242 - -
Viun3g04638 461 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 216 IPR036291 -
Viun3g04638 461 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04638 Viun-Chr3 53859111 53861577 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04638 K00012 - gmx:100781197 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04638 3 53859111 53861577 Viun3g04638 3 53859111 53861577 ECH