Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04620 ATGGTTTCGGAAAGAAAGGAATGGAAGAATGTGTGCGTGATTGGAGCAGGACCGTCGGGGATAGTGGTGGCGAGGGAGCTGAGAAGGGAAGGTCACGAGGTGGTGGTGTTGGAGCAGAACCATGACATTGGAGGGCAATGGCTATATGACCCAAATGTAGAACAAGAGGATGACCCTTTGGGAAGAAACCCTTGGCTGAAGGTGCATAGCAGCATCTACCAATCTTTAAGGCTCATGTCCCCCAGAGAGGTCATGGGCTTCACTGATTTCCCTTTCTCAGTGAAGAAAGGTAGAGACCCTAGGAGGTTTCCCAGCCATAGAGAGTACCTTCTCTACCTCAAGGACTTCTGTGAATGGTTTAAGGTGACAGAGATTATCAAGTTCAACACAAAGGTACTTTATGTGGGACCCTTAAACTATGGTGTCTCTTGTGAGGATTTGAAATGGGTTGTTAGAAGCAAAGAGAAGAAGAGTAACGAGGAAGTTGAACAGGTTTTTGACGCTGTGGTTGTGGCCACTGGCCATTACTCTAAGCCTAGATTGCCCTGCATTCAAGGAATGGAGAAATGGAGAAGAAAACAAATGCACAGTCACATTTACAGGTCCCCAGAGCCCTTCCGTGGGGAGATAGTGGTGGTGGTTGGAAATTCTTTTAGTGGACAAGAAATATCAATGGAACTTGTGAAAGTAGTGAAGGAACTGCACCTGAGTTCGAAATCACTTGACATTTATGAGGGTTTATCCAAAGTTATATCCAAATACGAGAACTTTCACCTTCGTCCACAGATCGACAACCTTCGAGAGGATGGGAGTGTCACTTTCACCGACGGTTCCTGCATTATCGCAGACACTATTTTATACTGCACCGGGTACGAGTATTCCTTCCCTTTTCTGGACACAAAGGGAATGGTTGTTGTGGATGATAACAGAGTGGGTCCTTTGTATGAACACACTTTCCCTCCATCACTTGCTCCTTCGCTTTCTCTCGTAGGCATCCCCAGAAGGATCCTAGGGCTTCCTTTCTTTGAGTCTCAAGGAAAATGGATAGCTCAACTACTTTCTGGGAAAAAGGTTTTGCCATCATATCAGGAAATGATGAAATCAATCGAAGAATTTTATCATTCAAAAGAGACTGCTGGTATTCCTAAACGCCACACCCATGAAATTGAAGACTTTGAGTATTGTGACAAATATGGAGAAAATGTTGGATTTCCAAAGTTGGAAGAGTGGAGAAAAGAGTTGACCGTATCTTCCATAGTGAACTACTTTGTCAACTTGGAGACTTGTCGTGATTCATGGTATGATGATGAGAAGCTTCAAGAAGCTCTTCAAACTCCATACTTCACTCAACTTCAACATCCTTCTTTCTAA 1371 0.4406 MVSERKEWKNVCVIGAGPSGIVVARELRREGHEVVVLEQNHDIGGQWLYDPNVEQEDDPLGRNPWLKVHSSIYQSLRLMSPREVMGFTDFPFSVKKGRDPRRFPSHREYLLYLKDFCEWFKVTEIIKFNTKVLYVGPLNYGVSCEDLKWVVRSKEKKSNEEVEQVFDAVVVATGHYSKPRLPCIQGMEKWRRKQMHSHIYRSPEPFRGEIVVVVGNSFSGQEISMELVKVVKELHLSSKSLDIYEGLSKVISKYENFHLRPQIDNLREDGSVTFTDGSCIIADTILYCTGYEYSFPFLDTKGMVVVDDNRVGPLYEHTFPPSLAPSLSLVGIPRRILGLPFFESQGKWIAQLLSGKKVLPSYQEMMKSIEEFYHSKETAGIPKRHTHEIEDFEYCDKYGENVGFPKLEEWRKELTVSSIVNYFVNLETCRDSWYDDEKLQEALQTPYFTQLQHPSF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04620 456 PIRSF FMO 247 408 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 PIRSF FMO 7 242 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 Gene3D - 183 288 IPR036188 -
Viun3g04620 456 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Viun3g04620 456 Pfam Flavin-binding monooxygenase-like 258 402 IPR020946 GO:0004499|GO:0050660|GO:0050661
Viun3g04620 456 PANTHER DIMETHYLANILINE MONOOXYGENASE 9 434 - -
Viun3g04620 456 SUPERFAMILY FAD/NAD(P)-binding domain 263 416 IPR036188 -
Viun3g04620 456 SUPERFAMILY FAD/NAD(P)-binding domain 9 236 IPR036188 -
Viun3g04620 456 FunFam Flavin-containing monooxygenase 183 288 - -
Viun3g04620 456 Gene3D - 11 434 IPR036188 -
Viun3g04620 456 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Viun3g04620 456 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04620 Viun-Chr3 53761862 53764638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04620 - - gmx:100817010 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04620 3 53761862 53764638 Viun3g04620 3 53761862 53764638 ECH