Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04617 ATGGGTAGTGAGATAGATACTAAATCAATTGAACCTGTCCGGAATGCTGTCTCTTTGTTTGGAGATAAAGGTGATCAGAAGAAATACCAAGCTGCAAAGAGTAAGAGTGATTGTGGAAATGAATTTGAGGAGCTGACAAAGGAATTGGCCAACTGCAAGTTTCAGTTAGAAGCAAAGCATGCTGCACACATGCAAGCACTTCTTAAGTTGGAGCAGAGCCAGAAGATGATTCACGAATTGTCCACCCTATTGAAGAAATCTGACATTGAAAGAAACAAGAACACGAGCGAATGTTCAGAATGTAGATCTCGCAAAGGTGAACTTGAATCCAAGATGAAGGAGATGGTTGATCAGAGTTTGGAGGCTGCAAAGATCCGAGACCAGTTTGCACATGTTTTGAGCGAACTGAAGGCCACACAAAGGGAGCTTCTTAACAAAGAAACAGAACTTGTTGCTGCTAGAGATTCAGAAATGAACTCTTTGACAAAAGCAAAACAATTGGAAGCCGCATTGGAGGCCGAAAAGGAACAGAAAGAAGAACTTCTGCAGCAAGTGAAGGAGCTCGATGAAGTTATTCACAGTTCAAAAGTAGCTGCCATTGAATCTGAGAAAGAGATGTTAGCTTTATTGTGTGAGAAGGATGAGCAAATTGATTTCGCTACAAAAGCTACTGCTGAGGTACAACAACAGCTAGAAGATATGAGAAAGCATGCGGAAATGTTACAGAATCAACCAATGGGTGTGCCTACAGTGGTTGATTCTCTTCTCCTGGAACATATGCTAGCTGATGAAAAACTCGTTTTATCTGAGGATTCTGCTCGCAAAGCCATAGACCAATTAAACATTGAGATGGAACAAAAGGACAGAAAGATGATGGATCAATCTGTGTATATTCACACACTAGAAATGGAATTGAGTGAGTTAAAGCAAGAAGTTACGGTTGCAAAGGAAGAAATAAATGCTTTGAGTATTACCAATGAATCACTTACAAGTGAGTTACATGAGGCTAAAGCAGAACTAAACATGAACAAGGGAAGCGACATTGAAACACAAGTGGAAATTGCATTGCTGAAGTCTAAGCTGCAGGAACACAGGGTGGTTTACAAAAATGGAAAGATTACTGAAGATTCTACAAGTAATGACTCAAAGGAAGAAGCTGAAGAGAGAAATGGTGAGAAGAAGAATGAGCATGTGACAGAGAAATCCTTATTTGGATTTTCAGAGTTAGCATTGATGAAAAAGGAGCTGGAAAATGCATCAGTGAAAATTTCGGAGTTAAGGGCTCGTGCAGAACAAGCTCTAAGTAGGGCTGAGTTTGCAGAGAATGCTAAAACTGCATTAGAGGAGAAAATAAGGAGACATAGGGAACATAGGCAGAGAAGAAGGCTTGCTCTTACTGCCCTTAGGGAGGAATCTACCCCTAAACCATTTAGTCCTTCCTCATCATATGGAACACCTGGATCCTACCAGCCCTTAGGTAAGGTTCTCAACATGAAATTGTGA 1503 0.4065 MGSEIDTKSIEPVRNAVSLFGDKGDQKKYQAAKSKSDCGNEFEELTKELANCKFQLEAKHAAHMQALLKLEQSQKMIHELSTLLKKSDIERNKNTSECSECRSRKGELESKMKEMVDQSLEAAKIRDQFAHVLSELKATQRELLNKETELVAARDSEMNSLTKAKQLEAALEAEKEQKEELLQQVKELDEVIHSSKVAAIESEKEMLALLCEKDEQIDFATKATAEVQQQLEDMRKHAEMLQNQPMGVPTVVDSLLLEHMLADEKLVLSEDSARKAIDQLNIEMEQKDRKMMDQSVYIHTLEMELSELKQEVTVAKEEINALSITNESLTSELHEAKAELNMNKGSDIETQVEIALLKSKLQEHRVVYKNGKITEDSTSNDSKEEAEERNGEKKNEHVTEKSLFGFSELALMKKELENASVKISELRARAEQALSRAEFAENAKTALEEKIRRHREHRQRRRLALTALREESTPKPFSPSSSYGTPGSYQPLGKVLNMKL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04617 500 Coils Coil 270 290 - -
Viun3g04617 500 Coils Coil 409 460 - -
Viun3g04617 500 MobiDBLite consensus disorder prediction 473 488 - -
Viun3g04617 500 Coils Coil 298 339 - -
Viun3g04617 500 Coils Coil 224 244 - -
Viun3g04617 500 Pfam Weak chloroplast movement under blue light 5 365 IPR008545 -
Viun3g04617 500 Coils Coil 161 191 - -
Viun3g04617 500 Coils Coil 136 156 - -
Viun3g04617 500 MobiDBLite consensus disorder prediction 467 490 - -
Viun3g04617 500 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 450 - -
Viun3g04617 500 MobiDBLite consensus disorder prediction 372 398 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04617 - - gmx:102665346 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04617 3 53691492 53693073 Viun3g04617 3 53691492 53693073 ECH