Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04613 ATGAGTTCTTCTCCGCCTCGTTCTCGTGGCGACGGCGAGAAAAGACCCAGGTTTTTCGATTCAAACGCCAAGGCCATTTGTTGGTCCAAGGCTGATATTGTCCCTGGCCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCCGGTAACATTGTCTGCAAACGTTTTTACAACTGCATCGGCTGCCTCTGCTACGAATACGATCACATCATTCCGTTTTCCAAAGGTGGTGAGTCAACAGCGGATAATTGTCAAATACTTCAGTCAAGAGTTAACAGACTCAAATCGGACAAATATGACATTGATGCTGATCAATTGAAAGACTACTCTTGTGAGGTTAATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTACGGCGATGTGGCGCGGCCGGGAAATCAGTGTCGTTGCAGAACTATTGCTGAGAAGCTTGGCAAATTTAAACCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA 492 0.4593 MSSSPPRSRGDGEKRPRFFDSNAKAICWSKADIVPGRHPERWRKDAAGNIVCKRFYNCIGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYDIDADQLKDYSCEVNFTDKELDIIEMAVYGDVARPGNQCRCRTIAEKLGKFKPKDDKDACKLPQG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04613 163 CDD HNHc 53 95 IPR003615 -
Viun3g04613 163 Pfam HNH endonuclease 65 96 IPR002711 GO:0003676|GO:0004519|GO:0008270
Viun3g04613 163 PANTHER HNH ENDONUCLEASE 6 141 - -
Viun3g04613 163 Gene3D - 30 118 - -
Viun3g04613 163 SMART HNH_5 46 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04613 Viun-Chr3 53669925 53675423 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04613 - - vra:106766777 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04613 3 53669925 53675423 Viun3g04613 3 53669925 53675423 ECH