Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04602 ATGGGGCAAGATAATCACCACAAGCGCAGCACCAGCAACGCTTTACCCACCTCCAACGCTCGAGGACGCGCCACCGGGCTCCCACGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATTCTATGCGGCTTTGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTTAATCTTGGCTCCTCCGATGCCGACGCCGTCAACCAGAACCTTATCGAGGAGACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCCTCCGATCCCGACGACCAGCAACCCTTCAACCCCAACGCTACCTTCACCCTCGGCCCCAAAATCAATAATTGGGACCAAGAGCGCCAAAATTGGCTCACTCAAAACCCTGAATACCCTAATTTCATCAGAGGTAAACCTCGCATCTTACTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCATTACCTCTTGAAGTCCATTAAGAACAAGATTGACTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCTAAGTTGCCTATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGACAGTGATGCGTTTTTTACTGATATGGTGTTTGAGCTTCCCATGTCTAAGTACGATGCGTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTTGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGTCAGTGGTCTTTGGATTTGCTTGATGAATGGGCTCCCATGGGACCTAAGGGGCCGGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCTTTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCCTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTACGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGCTGTAAGCCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAACTCTATGGGTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAATTTGATATTCGAAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.5 MGQDNHHKRSTSNALPTSNARGRATGLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLIEETNRILAEIRSDADPSDPDDQQPFNPNATFTLGPKINNWDQERQNWLTQNPEYPNFIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04602 445 FunFam xyloglucan 6-xylosyltransferase 2 135 286 - -
Viun3g04602 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016020|GO:0016757
Viun3g04602 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 136 283 IPR029044 -
Viun3g04602 445 MobiDBLite consensus disorder prediction 1 20 - -
Viun3g04602 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 20 430 IPR008630 GO:0016020|GO:0016757
Viun3g04602 445 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04602 Viun-Chr3 53592969 53594840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04602 10 437 Glycosyltransferase AT5G07720 80.046 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04602 K08238 - gmx:100819400 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04602 3 53592969 53594840 Viun3g04602 3 53592969 53594840 ECH