Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04598 ATGGGTTCTACCGCTGAAGACCGATCAGAGATTGTGTTCTTCGACGTGGAGACCAGCGTTCCCACTCGAACAGGCCAGGGTTTTGCCATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCGAAACTACTCAACTCTCATCCGACCCGCCGATCTCTCCGTCATCTCCCCCTTGTCCCAGCGCTGCAATGGCATCACCGCCGACGCCGTCGCCACCGCGCCGACTTTTGCCGACATTGCTCACCTCGTCTACGACCTTCTTCATGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTTGACTGTGTTCGGATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGAACCATTGACTCTCTAGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCAACTGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACTGCAAACAGTTGGGTTTCACCGAATACTATGACAAGAAGCCGCAGTAACGGGAAATCTCCATCACAGGGGGCCTTATCAAACATTAATGAGGGTTCTGTATTATCATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTAGCAATGAGCGGCCCAAAAGGGGATGCCCTTAATAATGCAGATCCTAATATAGTTCAATCGGATCCTTTTAATTTGAGTGCTCTGGAGGAAGAAATAAAGAGAGAACCCATTAAGTCAGATGTTTCCATGGTGGAAAAACCCATGCAAGAGTCACCTGATTGGGCTTCCTCGTCTTCTGTGTTTCAGCCTTGCAGCACCTCTATTCTTGTTTTAGAACCTGATGGAATATGTGTGCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCAAGGCAGTCAGAGAATAGAATTACTGCATGAAGGTTTCCCATTCCAACTTCATTGTACTGATTTGAAAGTGCGGTTTGGAATAAGCACAAAGTTTTTTGATACTGCTGGCCGGCCACGATTGAATTTTGTGGTTGATTCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACCACGTTGCTCAGAAGTTGACAGTGGATTCTGGCAGCAGCTCTGATTGGAGGCCTGTTGTCATTAGAAAAGAAGGTTTCTTCAACTATCCTACTGTCAGATTGCACATACCTACAGCAGTAGTCGCAGACGTTGCCTTTTATGCCACAGAAATATACCAGAAAGAGTCTTCTGGAGCAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCTTTAGATCCCTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAATAG 1515 0.4488 MGSTAEDRSEIVFFDVETSVPTRTGQGFAILEFGAILVCPKTLTELRNYSTLIRPADLSVISPLSQRCNGITADAVATAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNTMTRSRSNGKSPSQGALSNINEGSVLSSPAVESKDKSHPIISLAMSGPKGDALNNADPNIVQSDPFNLSALEEEIKREPIKSDVSMVEKPMQESPDWASSSSVFQPCSTSILVLEPDGICVPSIDASLVPSFQGSQRIELLHEGFPFQLHCTDLKVRFGISTKFFDTAGRPRLNFVVDSSPSLCNVLDACDHVAQKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVADVAFYATEIYQKESSGAVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHCK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04598 504 SMART exoiiiendus 10 184 IPR013520 -
Viun3g04598 504 MobiDBLite consensus disorder prediction 199 232 - -
Viun3g04598 504 FunFam Exonuclease family protein 4 182 - -
Viun3g04598 504 Pfam Exonuclease 12 175 IPR013520 -
Viun3g04598 504 Gene3D - 4 182 IPR036397 GO:0003676
Viun3g04598 504 CDD DEDDh 12 176 - -
Viun3g04598 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 8 493 - -
Viun3g04598 504 MobiDBLite consensus disorder prediction 199 234 - -
Viun3g04598 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04598 Viun-Chr3 53568849 53572710 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04598 - - ccaj:109808157 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04598 3 53568849 53572710 Viun3g04598 3 53568849 53572710 ECH